Analysis of transcripts and splice isoforms in Medicago sativa L. by single-molecule long-read sequencing
Y Chao, J Yuan, T Guo, L Xu, Z Mu, L Han - Plant Molecular Biology, 2019 - Springer
… To validate the accuracy of the splice isoforms detected with SMRT, we randomly selected
5 … size of the fragments were consistent with the splice isoforms identified from Iso-Seq data, …
5 … size of the fragments were consistent with the splice isoforms identified from Iso-Seq data, …
Structure and alternative splicing of a heat shock transcription factor gene, MsHSF1, in Medicago sativa
Z He, R Xie, H Zou, Y Wang, J Zhu, G Yu - Biochemical and biophysical …, 2007 - Elsevier
… alternative-spliced isoforms [5], [6], [7], [8], [9], [10], [11], [12]. These alternative-spliced isoforms
are … The only example of alternative splicing inside the DBD is the splicing of SmHSF with …
are … The only example of alternative splicing inside the DBD is the splicing of SmHSF with …
Characterization and comparison of intron structure and alternative splicing between Medicago truncatula, Populus trichocarpa, Arabidopsis and rice
JM Baek, P Han, A Iandolino, DR Cook - Plant molecular biology, 2008 - Springer
… As was observed in Medicago, the structure of AS isoforms is … in Medicago, with MtMYB1
exhibiting AS isoforms similar to … The fact that similar AS isoforms in Medicago, Arabidopsis …
exhibiting AS isoforms similar to … The fact that similar AS isoforms in Medicago, Arabidopsis …
[HTML][HTML] Maturation of the nodule-specific transcript MsHSF1c in Medicago sativa may involve interallelic trans-splicing
Z He, H Zou, Y Wang, J Zhu, G Yu - Genomics, 2008 - Elsevier
… alternative splicing events in various tissues. Here, we identified another spliced transcript
isoform… 827–828 for pre-mRNA splicing, we suggest that MsHSF1c may be generated by trans-…
isoform… 827–828 for pre-mRNA splicing, we suggest that MsHSF1c may be generated by trans-…
Pan-transcriptome identifying master genes and regulation network in response to drought and salt stresses in Alfalfa (Medicago sativa L.)
… splicing pattern as predicted in the reference genome. Isoforms belong to NNIC, isoforms with
novel splice … , demonstrating the usefulness of Iso-Seq to discover new isoforms in alfalfa. …
novel splice … , demonstrating the usefulness of Iso-Seq to discover new isoforms in alfalfa. …
The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies
… This methodology has also proven useful for discovery of novel transcripts (coding and
non-coding) and identification of alternative splice variants. The Illumina RNA-seq platform …
non-coding) and identification of alternative splice variants. The Illumina RNA-seq platform …
Reference nodule transcriptomes for Melilotus officinalis and Medicago sativa cv. Algonquin
R Huang, WA Snedden, GC Dicenzo - Plant Direct, 2022 - Wiley Online Library
… Contigs expected to represent splice variants of a single gene were merged into so-called
“supertranscripts” using the SuperTranscripts program, resulting in compressed assemblies of …
“supertranscripts” using the SuperTranscripts program, resulting in compressed assemblies of …
Comparative Proteomic Analysis Reveals Differential Root Proteins in Medicago sativa and Medicago truncatula in Response to Salt Stress
R Long, M Li, T Zhang, J Kang, Y Sun, L Cong… - Frontiers in Plant …, 2016 - frontiersin.org
… the proteome-level changes associated with salt stress response in Medicago sativa cv.
Zhongmu-1 and Medicago truncatula cv. Jemalong A17 roots. Our physiological and phenotypic …
Zhongmu-1 and Medicago truncatula cv. Jemalong A17 roots. Our physiological and phenotypic …
Genome-wide identification and comparative analysis of alternative splicing across four legume species
Z Wang, H Zhang, W Gong - Planta, 2019 - Springer
… Relative to the predominant transcript isoform, AS can be divided into four main types,
intron … sativa) and clover (Trifolium sp.) as well as the model plant M. truncatula. Medicago …
intron … sativa) and clover (Trifolium sp.) as well as the model plant M. truncatula. Medicago …
Cold-dependent alternative splicing of a Jumonji C domain-containing gene MtJMJC5 in Medicago truncatula
Y Shen, X Wu, D Liu, S Song, D Liu, H Wang - Biochemical and biophysical …, 2016 - Elsevier
… splicing at the … splicing variants were sensitive to nonsense-mediated decay, the premature
termination codon-harboring alternative splicing variants sharing the 3′ alternative splicing …
termination codon-harboring alternative splicing variants sharing the 3′ alternative splicing …
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