Impact of regulatory variation across human iPSCs and differentiated cells

NE Banovich, YI Li, A Raj, MC Ward… - Genome …, 2018 - genome.cshlp.org
Induced pluripotent stem cells (iPSCs) are an essential tool for studying cellular
differentiation and cell types that are otherwise difficult to access. We investigated the use of …

Subtelomeric hotspots of aberrant 5-hydroxymethylcytosine-mediated epigenetic modifications during reprogramming to pluripotency

T Wang, H Wu, Y Li, KE Szulwach, L Lin, X Li… - Nature cell …, 2013 - nature.com
Mammalian somatic cells can be directly reprogrammed into induced pluripotent stem cells
(iPSCs) by introducing defined sets of transcription factors. Somatic cell reprogramming …

X-inactivation in female human embryonic stem cells is in a nonrandom pattern and prone to epigenetic alterations

Y Shen, Y Matsuno, SD Fouse, N Rao… - Proceedings of the …, 2008 - National Acad Sciences
X chromosome inactivation (XCI) is an essential mechanism for dosage compensation of X-
linked genes in female cells. We report that subcultures from lines of female human …

Reprogramming factor expression initiates widespread targeted chromatin remodeling

RP Koche, ZD Smith, M Adli, H Gu, M Ku, A Gnirke… - Cell stem cell, 2011 - cell.com
Despite rapid progress in characterizing transcription factor-driven reprogramming of
somatic cells to an induced pluripotent stem cell (iPSC) state, many mechanistic questions …

[HTML][HTML] Reference Maps of human ES and iPS cell variation enable high-throughput characterization of pluripotent cell lines

C Bock, E Kiskinis, G Verstappen, H Gu, G Boulting… - Cell, 2011 - cell.com
The developmental potential of human pluripotent stem cells suggests that they can produce
disease-relevant cell types for biomedical research. However, substantial variation has been …

Pluripotent stem cells in disease modelling and drug discovery

Y Avior, I Sagi, N Benvenisty - Nature reviews Molecular cell biology, 2016 - nature.com
Experimental modelling of human disorders enables the definition of the cellular and
molecular mechanisms underlying diseases and the development of therapies for treating …

Epigenetic and transcriptional regulations prime cell fate before division during human pluripotent stem cell differentiation

P Madrigal, S Deng, Y Feng, S Militi, KJ Goh… - Nature …, 2023 - nature.com
Stem cells undergo cellular division during their differentiation to produce daughter cells
with a new cellular identity. However, the epigenetic events and molecular mechanisms …

[HTML][HTML] Epigenetics of reprogramming to induced pluripotency

B Papp, K Plath - Cell, 2013 - cell.com
Reprogramming to induced pluripotent stem cells (iPSCs) proceeds in a stepwise manner
with reprogramming factor binding, transcription, and chromatin states changing during …

Cellular metabolism and induced pluripotency

J Wu, A Ocampo, JCI Belmonte - Cell, 2016 - cell.com
The discovery of induced pluripotent stem cells (iPSCs) a decade ago, which we are
celebrating in this issue of Cell, represents a landmark discovery in biomedical research …

A comparison of genetically matched cell lines reveals the equivalence of human iPSCs and ESCs

J Choi, S Lee, W Mallard, K Clement… - Nature …, 2015 - nature.com
The equivalence of human induced pluripotent stem cells (hiPSCs) and human embryonic
stem cells (hESCs) remains controversial. Here we use genetically matched hESC and …