Genome-wide SNP genotyping resolves signatures of selection and tetrasomic recombination in peanut

J Clevenger, Y Chu, C Chavarro, G Agarwal, DJ Bertioli… - Molecular plant, 2017 - cell.com
Abstract Peanut (Arachis hypogaea; 2n= 4x= 40) is a nutritious food and a good source of
vitamins, minerals, and healthy fats. Expansion of genetic and genomic resources for …

Next-generation transcriptome sequencing, SNP discovery and validation in four market classes of peanut, Arachis hypogaea L.

R Chopra, G Burow, A Farmer, J Mudge… - Molecular Genetics and …, 2015 - Springer
Single-nucleotide polymorphisms, which can be identified in the thousands or millions from
comparisons of transcriptome or genome sequences, are ideally suited for making high …

Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A-and B-genome diploid species of peanut

Y Guo, S Khanal, S Tang, JE Bowers, AF Heesacker… - BMC genomics, 2012 - Springer
Background Cultivated peanut or groundnut (Arachis hypogaea L.) is an important oilseed
crop with an allotetraploid genome (AABB, 2 n= 4 x= 40). Both the low level of genetic …

The value of diploid peanut relatives for breeding and genomics

HT Stalker, SP Tallury, P Ozias-Akins… - Peanut …, 2013 - meridian.allenpress.com
Collection, evaluation, and introgression research has been conducted with Arachis species
for more than 60 years. Eighty species in the genus have been described and additional …

[HTML][HTML] Sequencing of cultivated peanut, Arachis hypogaea, yields insights into genome evolution and oil improvement

X Chen, Q Lu, H Liu, J Zhang, Y Hong, H Lan, H Li… - Molecular plant, 2019 - cell.com
Cultivated peanut (Arachis hypogaea) is an allotetraploid crop planted in Asia, Africa, and
America for edible oil and protein. To explore the origins and consequences of tetraploidy …

Comparison of Arachis monticola with Diploid and Cultivated Tetraploid Genomes Reveals Asymmetric Subgenome Evolution and Improvement of Peanut

D Yin, C Ji, Q Song, W Zhang, X Zhang… - Advanced …, 2020 - Wiley Online Library
Like many important crops, peanut is a polyploid that underwent polyploidization, evolution,
and domestication. The wild allotetraploid peanut species Arachis monticola (A. monticola) …

A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut

ED Nagy, Y Guo, S Tang, JE Bowers, RA Okashah… - BMC genomics, 2012 - Springer
Abstract Background Cultivated peanut (Arachis hypogaea) is an allotetraploid species
whose ancestral genomes are most likely derived from the A-genome species, A …

Target amplicon sequencing for genotyping genome‐wide single nucleotide polymorphisms identified by whole‐genome resequencing in peanut

K Shirasawa, C Kuwata, M Watanabe… - The Plant …, 2016 - Wiley Online Library
Genome‐wide genotyping data regarding breeding materials are essential resources for
improving breeding efficiency, especially in plants with complex genomes with a high …

[HTML][HTML] Genomic insights into the genetic signatures of selection and seed trait loci in cultivated peanut

Y Liu, L Shao, J Zhou, R Li, MK Pandey, Y Han… - Journal of advanced …, 2022 - Elsevier
Abstract Introduction Cultivated peanut (Arachis hypogaea L.) is an important oil crop for
human nutrition and is cultivated in> 100 countries. However, the present knowledge of its …

Comparisons of De Novo Transcriptome Assemblers in Diploid and Polyploid Species Using Peanut (Arachis spp.) RNA-Seq Data

R Chopra, G Burow, A Farmer, J Mudge, CE Simpson… - PloS one, 2014 - journals.plos.org
The narrow genetic base and limited genetic information on Arachis species have hindered
the process of marker-assisted selection of peanut cultivars. However, recent developments …