Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological …
Background Understanding Mycobacterium tuberculosis (Mtb) transmission is essential to
guide efficient tuberculosis control strategies. Traditional strain typing lacks sufficient …
guide efficient tuberculosis control strategies. Traditional strain typing lacks sufficient …
Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing
D Stucki, M Ballif, T Bodmer, M Coscolla… - The Journal of …, 2015 - academic.oup.com
Background. Whole-genome sequencing (WGS) is increasingly used in molecular-
epidemiological investigations of bacterial pathogens, despite cost-and time-intensive …
epidemiological investigations of bacterial pathogens, despite cost-and time-intensive …
[HTML][HTML] Role and value of whole genome sequencing in studying tuberculosis transmission
Background Tuberculosis (TB) remains a serious public health threat worldwide.
Theoretically ultimate resolution of whole genome sequencing (WGS) for Mycobacterium …
Theoretically ultimate resolution of whole genome sequencing (WGS) for Mycobacterium …
Mycobacterium tuberculosis–heterogeneity revealed through whole genome sequencing
The emergence of whole genome sequencing (WGS) technologies as primary research
tools has allowed for the detection of genetic diversity in Mycobacterium tuberculosis (Mtb) …
tools has allowed for the detection of genetic diversity in Mycobacterium tuberculosis (Mtb) …
Whole-genome sequencing to detect recent transmission of Mycobacterium tuberculosis in settings with a high burden of tuberculosis
T Luo, C Yang, Y Peng, L Lu, G Sun, J Wu, X Jin… - Tuberculosis, 2014 - Elsevier
Whole genome sequencing (WGS) of Mycobacterium tuberculosis has been used to trace
the transmission of M. tuberculosis, the causative agent of tuberculosis (TB). Previously …
the transmission of M. tuberculosis, the causative agent of tuberculosis (TB). Previously …
Use of Whole Genome Sequencing to Determine the Microevolution of Mycobacterium tuberculosis during an Outbreak
M Kato-Maeda, C Ho, B Passarelli, N Banaei… - PloS one, 2013 - journals.plos.org
Rationale Current tools available to study the molecular epidemiology of tuberculosis do not
provide information about the directionality and sequence of transmission for tuberculosis …
provide information about the directionality and sequence of transmission for tuberculosis …
Whole genome sequencing of Mycobacterium tuberculosis for detection of recent transmission and tracing outbreaks: a systematic review
V Nikolayevskyy, K Kranzer, S Niemann, F Drobniewski - Tuberculosis, 2016 - Elsevier
Contact tracing complemented with genotyping is considered an important means of
understanding person-to-person transmission of tuberculosis (TB). It still remains unclear …
understanding person-to-person transmission of tuberculosis (TB). It still remains unclear …
MTBseq: a comprehensive pipeline for whole genome sequence analysis of Mycobacterium tuberculosis complex isolates
TA Kohl, C Utpatel, V Schleusener, MR De Filippo… - PeerJ, 2018 - peerj.com
Analyzing whole-genome sequencing data of Mycobacterium tuberculosis complex (MTBC)
isolates in a standardized workflow enables both comprehensive antibiotic resistance …
isolates in a standardized workflow enables both comprehensive antibiotic resistance …
[HTML][HTML] Mycobacterium tuberculosis and whole-genome sequencing: how close are we to unleashing its full potential?
Background Nearly two decades after completion of the genome sequence of
Mycobacterium tuberculosis (MTB), and with the advent of next generation sequencing …
Mycobacterium tuberculosis (MTB), and with the advent of next generation sequencing …
Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach
TA Kohl, R Diel, D Harmsen, J Rothgänger… - Journal of clinical …, 2014 - Am Soc Microbiol
Whole-genome sequencing (WGS) allows for effective tracing of Mycobacterium
tuberculosis complex (MTBC)(tuberculosis pathogens) transmission. However, it is difficult to …
tuberculosis complex (MTBC)(tuberculosis pathogens) transmission. However, it is difficult to …
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