Annual Mycobacterium tuberculosis infection risk and interpretation of clustering statistics.

E Vynnycky, MW Borgdorff… - Emerging …, 2003 - researchonline.lshtm.ac.uk
Several recent studies have used proportions of tuberculosis cases sharing identical DNA
fingerprint patterns (ie, isolate clustering) to estimate the extent of disease attributable to …

Diversity of Mycobacterium tuberculosis genotypes circulating in Ndola, Zambia

C Mulenga, IC Shamputa, D Mwakazanga… - BMC infectious …, 2010 - Springer
Background Tuberculosis (TB) is one of the major public health problems in Zambia.
However, information about lineages of M. tuberculosis complex (MTBC) isolates useful for …

Automated High-Throughput Genotyping for Study of Global Epidemiology of Mycobacterium tuberculosis Based on Mycobacterial Interspersed Repetitive Units

P Supply, S Lesjean, E Savine, K Kremer… - Journal of clinical …, 2001 - Am Soc Microbiol
Large-scale genotyping of Mycobacterium tuberculosis is especially challenging, as the
current typing methods are labor-intensive and the results are difficult to compare among …

Can 15-locus mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis provide insight into the evolution of Mycobacterium tuberculosis?

A Gibson, T Brown, L Baker… - Applied and …, 2005 - Am Soc Microbiol
The phylogeny and evolution of the bacterium Mycobacterium tuberculosis is still poorly
understood despite the application of a variety of molecular techniques. We analyzed 469 M …

Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial

AA Witney, ALE Bateson, A Jindani, PPJ Phillips… - BMC medicine, 2017 - Springer
Background RIFAQUIN was a tuberculosis chemotherapy trial in southern Africa including
regimens with high-dose rifapentine with moxifloxacin. Here, the application of whole …

Reduced Transmissibility of East African Indian Strains of Mycobacterium tuberculosis

AS Albanna, MB Reed, KV Kotar, A Fallow… - PloS one, 2011 - journals.plos.org
Background Mycobacterium tuberculosis (MTB) has been classified into 4 main lineages.
Some reports have associated certain lineages with particular clinical phenotypes, but there …

Comparative Study of IS6110 Restriction Fragment Length Polymorphism and Variable-Number Tandem-Repeat Typing of Mycobacterium tuberculosis Isolates in the …

JL de Beer, J van Ingen, G de Vries… - Journal of clinical …, 2013 - Am Soc Microbiol
In order to switch from IS 6110 and polymorphic GC-rich repetitive sequence (PGRS)
restriction fragment length polymorphism (RFLP) to 24-locus variable-number tandem …

High-resolution minisatellite-based typing as a portable approach to global analysis of Mycobacterium tuberculosis molecular epidemiology

E Mazars, S Lesjean, AL Banuls… - Proceedings of the …, 2001 - National Acad Sciences
The worldwide threat of tuberculosis to human health emphasizes the need to develop novel
approaches to a global epidemiological surveillance. The current standard for …

Progression Toward an Improved DNA Amplification-Based Typing Technique in the Study of Mycobacterium tuberculosis Epidemiology

KK Gopaul, TJ Brown, AL Gibson… - Journal of clinical …, 2006 - Am Soc Microbiol
While high-copy-number IS 6110-based restriction fragment length polymorphism (HCN-
RFLP) is the gold standard for typing most Mycobacterium tuberculosis strains, the time …

Genotypic and Spatial Analysis of Mycobacterium tuberculosis Transmission in a High-Incidence Urban Setting

FKC Ribeiro, W Pan, A Bertolde… - Clinical Infectious …, 2015 - academic.oup.com
Abstract Background. Genotyping Mycobacterium tuberculosis isolates allows study of
dynamics of tuberculosis transmission, while geoprocessing allows spatial analysis of …