[HTML][HTML] Fast sequence-based microsatellite genotyping development workflow
Application of high-throughput sequencing technologies to microsatellite genotyping
(SSRseq) has been shown to remove many of the limitations of electrophoresis-based …
(SSRseq) has been shown to remove many of the limitations of electrophoresis-based …
Microsatellites and their application to population genetic studies
MW Bruford, RK Wayne - Current opinion in genetics & development, 1993 - Elsevier
Microsatellites may soon become the markers of choice for molecular population genetic
studies. However, our knowledge of these simple repetitive sequences and how they evolve …
studies. However, our knowledge of these simple repetitive sequences and how they evolve …
Survey of simple sequence repeats in completed fungal genomes
H Karaoglu, CMY Lee, W Meyer - Molecular biology and …, 2005 - academic.oup.com
The use of simple sequence repeats or microsatellites as genetic markers has become very
popular because of their abundance and length variation between different individuals …
popular because of their abundance and length variation between different individuals …
Variation of microsatellite size homoplasy across electromorphs, loci, and populations in three invertebrate species
Size homoplasy was analyzed at microsatellite loci by sequencing electromorphs, that is,
variants of the same size (base pairs). This study was conducted using five interrupted …
variants of the same size (base pairs). This study was conducted using five interrupted …
Genome size and microsatellites: the effect of nuclear size on amplification potential
TWJ Garner - Genome, 2002 - cdnsciencepub.com
Although the frequency of microsatellite DNA regions generally increases with increasing
genome size, genome size has a negative effect on polymerase chain reaction (PCR) …
genome size, genome size has a negative effect on polymerase chain reaction (PCR) …
[HTML][HTML] 32 species validation of a new Illumina paired-end approach for the development of microsatellites
SL Lance, CN Love, SO Nunziata, JR O'Bryhim… - PloS one, 2013 - journals.plos.org
Development and optimization of novel species-specific microsatellites, or simple sequence
repeats (SSRs) remains an important step for studies in ecology, evolution, and behavior …
repeats (SSRs) remains an important step for studies in ecology, evolution, and behavior …
Microsatellite evolution: a battle between replication slippage and point mutation
H Ellegren - TRENDS in Genetics, 2002 - cell.com
Pick a eukaryotic genome and initiate shot-gun sequencing–you will not have to sequence
too many clones until you start seeing simple tandem repeat sequences, such as …
too many clones until you start seeing simple tandem repeat sequences, such as …
[HTML][HTML] Microsatellite interruptions stabilize primate genomes and exist as population-specific single nucleotide polymorphisms within individual human genomes
Interruptions of microsatellite sequences impact genome evolution and can alter disease
manifestation. However, human polymorphism levels at interrupted microsatellites (iMSs) …
manifestation. However, human polymorphism levels at interrupted microsatellites (iMSs) …
[HTML][HTML] Genome-wide detection of short tandem repeat expansions by long-read sequencing
Background Short tandem repeat (STR), or “microsatellite”, is a tract of DNA in which a
specific motif (typically< 10 base pairs) is repeated multiple times. STRs are abundant …
specific motif (typically< 10 base pairs) is repeated multiple times. STRs are abundant …