Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding

S Liu, D Zuo, H Cheng, M He, Q Wang, L Lv, Y Zhang… - Genome Biology, 2023 - Springer
Background Many elite genes have been identified from the available cotton genomic data,
providing various genetic resources for gene-driven breeding. However, backbone cultivar …

Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing

JT Page, MD Huynh, ZS Liechty, K Grupp… - G3: Genes …, 2013 - academic.oup.com
Understanding the composition, evolution, and function of the Gossypium hirsutum (cotton)
genome is complicated by the joint presence of two genomes in its nucleus (AT and DT …

Evolution and diversity of the cotton genome

G Hu, CE Grover, J Jareczek, D Yuan, Y Dong… - Cotton precision …, 2021 - Springer
We present an overview of Gossypium genome evolution and the implications of this
understanding for targeted breeding objectives. The cotton genus (Gossypium) contains …

Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant

R Hovav, JA Udall, B Chaudhary… - Proceedings of the …, 2008 - National Acad Sciences
Polyploidy is an important driver of eukaryotic evolution, evident in many animals, fungi, and
plants. One consequence of polyploidy is subfunctionalization, in which the ancestral …

Genomes for jeans: cotton genomics for engineering superior fiber

S Mansoor, AH Paterson - Trends in biotechnology, 2012 - cell.com
Twenty years ago, scientists predicted that better understanding of fiber development would
lead to novel ways to engineer superior cotton fiber. Advances in genetic resources, DNA …

High‐density genetic variation maps reveal the correlation between asymmetric interspecific introgressions and improvement of agronomic traits in Upland and Pima …

X Nie, T Wen, P Shao, B Tang… - The Plant …, 2020 - Wiley Online Library
The two new world tetraploid cottons, Gossypium hirsutum and Gossypium barbadense, are
cultivated worldwide and are characterised by a high yield and superior fibre quality …

Genomic analyses reveal the genetic basis of early maturity and identification of loci and candidate genes in upland cotton (Gossypium hirsutum L.)

L Li, C Zhang, J Huang, Q Liu, H Wei… - Plant Biotechnology …, 2021 - Wiley Online Library
Although upland cotton (Gossypium hirsutism L.) originated in the tropics, this early maturity
cotton can be planted as far north as 46° N in China due to the accumulation of numerous …

LncRNAs in polyploid cotton interspecific hybrids are derived from transposon neofunctionalization

T Zhao, X Tao, S Feng, L Wang, H Hong, W Ma… - Genome biology, 2018 - Springer
Background Interspecific hybridization and whole genome duplication are driving forces of
genomic and organism diversification. But the effect of interspecific hybridization and whole …

The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism

R Hovav, JA Udall, B Chaudhary, E Hovav… - PLoS …, 2008 - journals.plos.org
A central question in evolutionary biology concerns the developmental processes by which
new phenotypes arise. An exceptional example of evolutionary innovation is the single …

Homoeologous nonreciprocal recombination in polyploid cotton

A Salmon, L Flagel, B Ying, JA Udall… - New …, 2010 - Wiley Online Library
Polyploid formation and processes that create partial genomic duplication generate
redundant genomic information, whose fate is of particular interest to evolutionary biologists …