[HTML][HTML] Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

S Ding, S Wang, K He, M Jiang, F Li - BMC genomics, 2017 - Springer
Background Simple sequence repeats (SSR), also called microsatellites, have been widely
used as genetic markers, and have been extensively studied in some model insects. At …

Next generation sequencing and FISH reveal uneven and nonrandom microsatellite distribution in two grasshopper genomes

FJ Ruiz-Ruano, Á Cuadrado, EE Montiel… - Chromosoma, 2015 - Springer
Simple sequence repeats (SSRs), also known as microsatellites, are one of the prominent
DNA sequences shaping the repeated fraction of eukaryotic genomes. In spite of their …

Comparison of microsatellite distribution patterns in twenty-nine beetle genomes

X Song, T Yang, X Yan, F Zheng, X Xu, C Zhou - Gene, 2020 - Elsevier
Simple sequence repeats (SSRs) represent an important source of genetic variation that
provides a basis for adaptation to different environments in organisms. In this study, we …

Motif mismatches in microsatellites: insights from genome-wide investigation among 20 insect species

SK Behura, DW Severson - DNA Research, 2015 - academic.oup.com
We present a detailed genome-wide comparative study of motif mismatches of
microsatellites among 20 insect species representing five taxonomic orders. The results …

Genome-wide comparative analysis of simple sequence coding repeats among 25 insect species

SK Behura, DW Severson - Gene, 2012 - Elsevier
We present a detailed genome-scale comparative analysis of simple sequence repeats
within protein coding regions among 25 insect genomes. The repetitive sequences in the …

Microsatellite flanking region similarities among different loci within insect species

E Meglécz, SJ Anderson, D Bourguet… - Insect Molecular …, 2007 - Wiley Online Library
Although microsatellites are ubiquitous in eukaryota, the number of available markers varies
strongly among taxa. This meta‐analysis was conducted on 32 insect species. Sequences …

[HTML][HTML] Association of microsatellite pairs with segmental duplications in insect genomes

SK Behura, DW Severson - Bmc Genomics, 2013 - Springer
Abstract Background Segmental duplications (SDs), also known as low-copy repeats, are
DNA sequences of length greater than 1 kb which are duplicated with a high degree of …

Patterns of evolutionary conservation of microsatellites (SSRs) suggest a faster rate of genome evolution in Hymenoptera than in Diptera

E Stolle, JH Kidner, RFA Moritz - Genome biology and evolution, 2013 - academic.oup.com
Microsatellites, or simple sequence repeats (SSRs), are common and widespread DNA
elements in genomes of many organisms. However, their dynamics in genome evolution is …

[HTML][HTML] Patterns of microsatellite distribution across eukaryotic genomes

S Srivastava, AK Avvaru, DT Sowpati, RK Mishra - BMC genomics, 2019 - Springer
Abstract Background Microsatellites, or Simple Sequence Repeats (SSRs), are short tandem
repeats of 1–6 nt motifs present in all genomes. Emerging evidence points to their role in …

InSatDb: a microsatellite database of fully sequenced insect genomes

S Archak, E Meduri, PS Kumar… - Nucleic Acids …, 2007 - academic.oup.com
InSatDb presents an interactive interface to query information regarding microsatellite
characteristics per se of five fully sequenced insect genomes (fruit-fly, honeybee, malarial …