[HTML][HTML] Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects
S Ding, S Wang, K He, M Jiang, F Li - BMC genomics, 2017 - Springer
Background Simple sequence repeats (SSR), also called microsatellites, have been widely
used as genetic markers, and have been extensively studied in some model insects. At …
used as genetic markers, and have been extensively studied in some model insects. At …
Next generation sequencing and FISH reveal uneven and nonrandom microsatellite distribution in two grasshopper genomes
Simple sequence repeats (SSRs), also known as microsatellites, are one of the prominent
DNA sequences shaping the repeated fraction of eukaryotic genomes. In spite of their …
DNA sequences shaping the repeated fraction of eukaryotic genomes. In spite of their …
Comparison of microsatellite distribution patterns in twenty-nine beetle genomes
X Song, T Yang, X Yan, F Zheng, X Xu, C Zhou - Gene, 2020 - Elsevier
Simple sequence repeats (SSRs) represent an important source of genetic variation that
provides a basis for adaptation to different environments in organisms. In this study, we …
provides a basis for adaptation to different environments in organisms. In this study, we …
Motif mismatches in microsatellites: insights from genome-wide investigation among 20 insect species
SK Behura, DW Severson - DNA Research, 2015 - academic.oup.com
We present a detailed genome-wide comparative study of motif mismatches of
microsatellites among 20 insect species representing five taxonomic orders. The results …
microsatellites among 20 insect species representing five taxonomic orders. The results …
Genome-wide comparative analysis of simple sequence coding repeats among 25 insect species
SK Behura, DW Severson - Gene, 2012 - Elsevier
We present a detailed genome-scale comparative analysis of simple sequence repeats
within protein coding regions among 25 insect genomes. The repetitive sequences in the …
within protein coding regions among 25 insect genomes. The repetitive sequences in the …
Microsatellite flanking region similarities among different loci within insect species
E Meglécz, SJ Anderson, D Bourguet… - Insect Molecular …, 2007 - Wiley Online Library
Although microsatellites are ubiquitous in eukaryota, the number of available markers varies
strongly among taxa. This meta‐analysis was conducted on 32 insect species. Sequences …
strongly among taxa. This meta‐analysis was conducted on 32 insect species. Sequences …
[HTML][HTML] Association of microsatellite pairs with segmental duplications in insect genomes
SK Behura, DW Severson - Bmc Genomics, 2013 - Springer
Abstract Background Segmental duplications (SDs), also known as low-copy repeats, are
DNA sequences of length greater than 1 kb which are duplicated with a high degree of …
DNA sequences of length greater than 1 kb which are duplicated with a high degree of …
Patterns of evolutionary conservation of microsatellites (SSRs) suggest a faster rate of genome evolution in Hymenoptera than in Diptera
E Stolle, JH Kidner, RFA Moritz - Genome biology and evolution, 2013 - academic.oup.com
Microsatellites, or simple sequence repeats (SSRs), are common and widespread DNA
elements in genomes of many organisms. However, their dynamics in genome evolution is …
elements in genomes of many organisms. However, their dynamics in genome evolution is …
[HTML][HTML] Patterns of microsatellite distribution across eukaryotic genomes
Abstract Background Microsatellites, or Simple Sequence Repeats (SSRs), are short tandem
repeats of 1–6 nt motifs present in all genomes. Emerging evidence points to their role in …
repeats of 1–6 nt motifs present in all genomes. Emerging evidence points to their role in …
InSatDb: a microsatellite database of fully sequenced insect genomes
InSatDb presents an interactive interface to query information regarding microsatellite
characteristics per se of five fully sequenced insect genomes (fruit-fly, honeybee, malarial …
characteristics per se of five fully sequenced insect genomes (fruit-fly, honeybee, malarial …