Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana

J Bergelson, F Roux - Nature Reviews Genetics, 2010 - nature.com
A major challenge in evolutionary biology and plant breeding is to identify the genetic basis
of complex quantitative traits, including those that contribute to adaptive variation. Here we …

The impact of genomics on the study of natural variation in Arabidopsis

JO Borevitz, M Nordborg - Plant physiology, 2003 - academic.oup.com
The genomic revolution is having a tremendous impact on the study of natural variation. It is
making it possible finally to discover the molecular basis of complex traits, a fundamental …

Genetic architecture of regulatory variation in Arabidopsis thaliana

X Zhang, AJ Cal, JO Borevitz - Genome research, 2011 - genome.cshlp.org
Studying the genetic regulation of expression variation is a key method to dissect complex
phenotypic traits. To examine the genetic architecture of regulatory variation in Arabidopsis …

Natural genetic variation in Arabidopsis: tools, traits and prospects for evolutionary ecology

C Shindo, G Bernasconi, CS Hardtke - Annals of Botany, 2007 - academic.oup.com
Background The model plant Arabidopsis thaliana (Arabidopsis) shows a wide range of
genetic and trait variation among wild accessions. Because of its unparalleled biological …

Phenotypic and genome-wide association with the local environment of Arabidopsis

Á Ferrero-Serrano, SM Assmann - Nature Ecology & Evolution, 2019 - nature.com
The environment imposes critical selective forces on all living organisms, and the sessile
nature of plants makes them particularly useful for investigating the relationship between …

GWAPP: a web application for genome-wide association mapping in Arabidopsis

Ü Seren, BJ Vilhjálmsson, MW Horton, D Meng… - The Plant …, 2012 - academic.oup.com
Arabidopsis thaliana is an important model organism for understanding the genetics and
molecular biology of plants. Its highly selfing nature, small size, short generation time, small …

What does Arabidopsis natural variation teach us (and does not teach us) about adaptation in plants?

C Trontin, S Tisne, L Bach, O Loudet - Current opinion in plant biology, 2011 - Elsevier
Sessile organisms such as plants have to develop adaptive responses to face
environmental change. In Arabidopsis thaliana populations, natural variation for stress …

Genetic mechanisms and evolutionary significance of natural variation in Arabidopsis

T Mitchell-Olds, J Schmitt - Nature, 2006 - nature.com
Genomic studies of natural variation in model organisms provide a bridge between
molecular analyses of gene function and evolutionary investigations of adaptation and …

An Arabidopsis Example of Association Mapping in Structured Samples

K Zhao, MJ Aranzana, S Kim, C Lister, C Shindo… - PLoS …, 2007 - journals.plos.org
A potentially serious disadvantage of association mapping is the fact that marker-trait
associations may arise from confounding population structure as well as from linkage to …

What can genome‐wide association studies tell us about the evolutionary forces maintaining genetic variation for quantitative traits?

EB Josephs, JR Stinchcombe, SI Wright - New Phytologist, 2017 - Wiley Online Library
Understanding the evolutionary forces that shape genetic variation within species has long
been a goal of evolutionary biology. Integrating data for the genetic architecture of traits from …