Long‐read sequencing reveals widespread intragenic structural variants in a recent allopolyploid crop plant
Genome structural variation (SV) contributes strongly to trait variation in eukaryotic species
and may have an even higher functional significance than single‐nucleotide polymorphism …
and may have an even higher functional significance than single‐nucleotide polymorphism …
Temporal patterns of diversification in Brassicaceae demonstrate decoupling of rate shifts and mesopolyploidization events
Abstract Background and Aims Whole-genome duplication (WGD) events are considered
important driving forces of diversification. At least 11 out of 52 Brassicaceae tribes had …
important driving forces of diversification. At least 11 out of 52 Brassicaceae tribes had …
Altered Patterns of Fractionation and Exon Deletions in Brassica rapa Support a Two-Step Model of Paleohexaploidy
The genome sequence of the paleohexaploid Brassica rapa shows that fractionation is
biased among the three subgenomes and that the least fractionated subgenome has …
biased among the three subgenomes and that the least fractionated subgenome has …
[HTML][HTML] The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection
The Brassica genus encompasses three diploid and three allopolyploid genomes, but a
clear understanding of the evolution of agriculturally important traits via polyploidy is lacking …
clear understanding of the evolution of agriculturally important traits via polyploidy is lacking …
Integrated syntenic and phylogenomic analyses reveal an ancient genome duplication in monocots
Unraveling widespread polyploidy events throughout plant evolution is a necessity for
inferring the impacts of whole-genome duplication (WGD) on speciation, functional …
inferring the impacts of whole-genome duplication (WGD) on speciation, functional …
[HTML][HTML] Syntenic gene analysis between Brassica rapa and other Brassicaceae species
Chromosomal synteny analysis is important in genome comparison to reveal genomic
evolution of related species. Shared synteny describes genomic fragments from different …
evolution of related species. Shared synteny describes genomic fragments from different …
The lack of negative association between TE load and subgenome dominance in synthesized Brassica allotetraploids
K Zhang, L Zhang, Y Cui, Y Yang… - Proceedings of the …, 2023 - National Acad Sciences
Polyploidization is important to the evolution of plants. Subgenome dominance is a distinct
phenomenon associated with most allopolyploids. A gene on the dominant subgenome …
phenomenon associated with most allopolyploids. A gene on the dominant subgenome …
Doubling down on genomes: polyploidy and crop plants
S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …
species are relatively recent allopolyploids, resulting from interspecific hybridization and …
[HTML][HTML] Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus
Background Polyploidy often results in considerable changes in gene expression, both
immediately and over evolutionary time. New phenotypes often arise with polyploid …
immediately and over evolutionary time. New phenotypes often arise with polyploid …
[HTML][HTML] Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa
Background In view of the immense value of Brassica rapa in the fields of agriculture and
molecular biology, the multinational Brassica rapa Genome Sequencing Project (BrGSP) …
molecular biology, the multinational Brassica rapa Genome Sequencing Project (BrGSP) …