Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing
JT Page, MD Huynh, ZS Liechty, K Grupp… - G3: Genes …, 2013 - academic.oup.com
Understanding the composition, evolution, and function of the Gossypium hirsutum (cotton)
genome is complicated by the joint presence of two genomes in its nucleus (AT and DT …
genome is complicated by the joint presence of two genomes in its nucleus (AT and DT …
[HTML][HTML] Origin of a subgenome and genome evolution of allotetraploid cotton species
P He, Y Zhang, G Xiao - Molecular Plant, 2020 - cell.com
Cotton (Gossypium spp.) is one of the most important economic crops in the world and also
a major source of natural fiber, oil, and protein. The morphology of cotton species varies …
a major source of natural fiber, oil, and protein. The morphology of cotton species varies …
Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons
Allotetraploid cotton (Gossypium) species represents a model system for the study of plant
polyploidy, molecular evolution, and domestication. Here, chromosome-scale genome …
polyploidy, molecular evolution, and domestication. Here, chromosome-scale genome …
[HTML][HTML] Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton
Background Modern allotetraploid cotton contains an “A” and “D” genome from an ancestral
polyploidy event that occurred approximately 1–2 million years ago. Diploid A-and D …
polyploidy event that occurred approximately 1–2 million years ago. Diploid A-and D …
[HTML][HTML] Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes
S Wang, J Chen, W Zhang, Y Hu, L Chang, L Fang… - Genome biology, 2015 - Springer
Background SNPs are the most abundant polymorphism type, and have been explored in
many crop genomic studies, including rice and maize. SNP discovery in allotetraploid cotton …
many crop genomic studies, including rice and maize. SNP discovery in allotetraploid cotton …
[HTML][HTML] Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence …
C Lu, C Zou, Y Zhang, D Yu, H Cheng, P Jiang… - BMC genomics, 2015 - Springer
Background Tetraploid cotton contains two sets of homologous chromosomes, the At-and Dt-
subgenomes. Consequently, many markers in cotton were mapped to multiple positions …
subgenomes. Consequently, many markers in cotton were mapped to multiple positions …
[HTML][HTML] Asymmetric evolution and domestication in allotetraploid cotton (Gossypium hirsutum L.)
Polyploidy plays a major role in genome evolution, which corresponds to environmental
changes over millions of years. The mechanisms of genome evolution, particularly during …
changes over millions of years. The mechanisms of genome evolution, particularly during …
Extensive and Biased Intergenomic Nonreciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton)
Genome duplication is thought to be central to the evolution of morphological complexity,
and some polyploids enjoy a variety of capabilities that transgress those of their diploid …
and some polyploids enjoy a variety of capabilities that transgress those of their diploid …
Comparative genomics of Gossypium and Arabidopsis: unraveling the consequences of both ancient and recent polyploidy
J Rong, JE Bowers, SR Schulze… - Genome …, 2005 - genome.cshlp.org
Both ancient and recent polyploidy, together with post-polyploidization loss of many
duplicated gene copies, complicates angiosperm comparative genomics. To explore an …
duplicated gene copies, complicates angiosperm comparative genomics. To explore an …
Evolution and diversity of the cotton genome
We present an overview of Gossypium genome evolution and the implications of this
understanding for targeted breeding objectives. The cotton genus (Gossypium) contains …
understanding for targeted breeding objectives. The cotton genus (Gossypium) contains …