Keystone taxa as drivers of microbiome structure and functioning
S Banerjee, K Schlaeppi… - Nature Reviews …, 2018 - nature.com
… , as well as in the human microbiome. We explore the importance of keystone taxa and
keystone guilds for microbiome structure and functioning and discuss the factors that determine …
keystone guilds for microbiome structure and functioning and discuss the factors that determine …
Top-down identification of keystone taxa in the microbiome
… pair-wise with a specific functional form. Another drawback, … strength-based or structure-based
keystones, simulate cohorts … hand, keystone taxa may be used as the main drivers when …
keystones, simulate cohorts … hand, keystone taxa may be used as the main drivers when …
Specialized metabolic functions of keystone taxa sustain soil microbiome stability
… keystone taxa can drive microbial community assembly [16, 17]. These keystone taxa are
highly connected taxa … roles in organizing the structure of the soil microbiome, with downstream …
highly connected taxa … roles in organizing the structure of the soil microbiome, with downstream …
Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots
… (c) Which taxa act as keystone and what are the drivers of such taxa in the root microbiota? …
the causality, in terms of the impact of keystone taxa on microbiome structure and functioning. …
the causality, in terms of the impact of keystone taxa on microbiome structure and functioning. …
Organic fertilization drives shifts in microbiome complexity and keystone taxa increase the resistance of microbial mediated functions to biodiversity loss
… functions and plays a central role in driving nutrient cycling, organic matter decomposition,
and climate regulation, with direct feedback effects on multiple ecosystem functions (… structure …
and climate regulation, with direct feedback effects on multiple ecosystem functions (… structure …
Keystone taxa predict compositional change in microbial communities
CM Herren, KD McMahon - Environmental Microbiology, 2018 - Wiley Online Library
… disturbance was a strong driver of compositional change. We used … We then applied this
workflow to data from the Human Microbiome … what traits or functions these keystone taxa share. …
workflow to data from the Human Microbiome … what traits or functions these keystone taxa share. …
Next generation microbiome research: identification of keystone species in the metabolic regulation of host-gut microbiota interplay
… identification of such keystone species functions is a major … influence on microbiome structure
and functioning irrespective … list of prominent keystone taxa of the human gut microbiome. …
and functioning irrespective … list of prominent keystone taxa of the human gut microbiome. …
Characterization of two keystone taxa, sulfur-oxidizing, and nitrate-reducing bacteria, by tracking their role transitions in the benzo [a] pyrene degradative microbiome
X Lin, B Qiao, R Chang, Y Li, W Zheng, Z He, Y Tian - Microbiome, 2023 - Springer
… Keystone taxa are drivers of microbiome structure and functioning, which may play critical
roles in microbiome-level responses to recalcitrant pollution and are a key to bioremediation. …
roles in microbiome-level responses to recalcitrant pollution and are a key to bioremediation. …
Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems
… Integrating suppressive microbiome may help in engineering … pathways to identify drivers
of soil suppressiveness at a … Our results suggest that specific functions such as pathogen …
of soil suppressiveness at a … Our results suggest that specific functions such as pathogen …
Reply to 'Can we predict microbial keystones?'
S Banerjee, K Schlaeppi… - Nature Reviews …, 2019 - nature.com
… Opinion article (Keystone taxa as drivers of microbiome structure and functioning. Nat. Rev.
… While Röttjers and Faust only consider empirically established keystone taxa, our aim was to …
… While Röttjers and Faust only consider empirically established keystone taxa, our aim was to …