An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV

Angiosperm Phylogeny Group… - Botanical journal of …, 2016 - academic.oup.com
17 genes from all three genomes for 640 angiosperm taxa, whereas Ruhfel et al. (2014) used
78 protein-coding plastid genes for 360 green plant taxa (… for the angiosperms. Stull et al. (…

[PDF][PDF] Phylogenomic insights into deep phylogeny of angiosperms based on broad nuclear gene sampling

L Yang, D Su, X Chang, CSP Foster, L Sun… - Plant …, 2020 - cell.com
… logenomic dataset of 1594 genes from 151 angiosperm taxa, including representatives of …
methods to reconstruct the angiosperm phylogeny using the 1594gene dataset. Our …

Origin of angiosperms and the puzzle of the Jurassic gap

HT Li, TS Yi, LM Gao, PF Ma, T Zhang, JB Yang… - Nature plants, 2019 - nature.com
… We reconstructed angiosperm phylogeny based on 80 genes from 2,881 plastid genomes …
an extensive taxon sampling for plastid phylogenomic analyses of angiosperms 9,17 , greatly …

Evolutionary history of the angiosperm flora of China

LM Lu, LF Mao, T Yang, JF Ye, B Liu, HL Li, M Sun… - Nature, 2018 - nature.com
genes (atpB, matK, ndhF and rbcL) and one mitochondrial gene (matR) were used to
reconstruct the phylogeny … of the expected phylogenetic diversity values by shuffling taxa labels …

Expanded taxonomic sampling coupled with gene genealogy interrogation provides unambiguous resolution for the evolutionary root of angiosperms

B Zhong, R Betancur-R - Genome Biology and Evolution, 2017 - academic.oup.com
… to investigate the evolutionary root of angiosperms using a transcriptomic data set consisting
of 310 nuclear genes and 46 taxa, including most major angiosperm lineages as well as …

[HTML][HTML] Plastid phylogenomic insights into relationships of all flowering plant families

HT Li, Y Luo, L Gan, PF Ma, LM Gao, JB Yang, J Cai… - BMC biology, 2021 - Springer
… of the Angiosperm Phylogeny Group (APG; … phylogenetic analyses with broad taxon
sampling but genes from different genomes (2351 angiosperm plastomes in [13]; 682 angiosperm

… and structural analyses of 18 complete plastomes across nearly all families of early-diverging eudicots, including an angiosperm-wide analysis of IR gene content …

Y Sun, MJ Moore, S Zhang, PS Soltis, DE Soltis… - Molecular Phylogenetics …, 2016 - Elsevier
… , the presence or absence of genes in the IR region across all taxa in our data set (where …
Angiosperm Phylogeny Group An update of the Angiosperm Phylogeny Group classification …

Anchored phylogenomics of angiosperms I: assessing the robustness of phylogenetic estimates

C Buddenhagen, AR Lemmon, EM Lemmon, J Bruhl… - BioRxiv, 2016 - biorxiv.org
… non-model taxa across the diversity of angiosperms. By taking an … of these genes contain
introns, we divided these genes into … of Malpighiales by the Angiosperm Phylogeny Group, our …

[PDF][PDF] A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life

RS Cook, S Dodsworth, N Epitawalage, E Françoso… - 2021 - scholar.archive.org
taxon and gene sampling would benefit phylogenetic data integration immensely, … taxa is
unprecedented, opening doors to a highly 618 integrated future for angiosperm phylogenetics

Tree of life for the genera of Chinese vascular plants

…, AM Lu, China Phylogeny Consortium - … of Systematics and …, 2016 - Wiley Online Library
… For angiosperms, most families in Angiosperm Phylogeny … To maximize the taxon coverage
and minimize missing data, … for 78 genes from 360 green plant taxa recovered Gnetales as …