Complementary-addressed site-directed spin labeling of long natural RNAs
ES Babaylova, AA Malygin, AA Lomzov… - Nucleic acids …, 2016 - academic.oup.com
… for long RNAs up-to-date. Here, we demonstrate that novel complementary-addressed SDSL
approach allows efficient spin labeling and following structural EPR studies of long RNAs. …
approach allows efficient spin labeling and following structural EPR studies of long RNAs. …
A review on recent advances in methods for site-directed spin labeling of long RNAs
K Huang, X Fang - International Journal of Biological Macromolecules, 2023 - Elsevier
… is inherently more flexible, which makes some well-established techniques for structural
determination of proteins, such as X-ray crystallography (XRC) and cryo-electron microscopy (…
determination of proteins, such as X-ray crystallography (XRC) and cryo-electron microscopy (…
Site-directed spin labeling for EPR studies of nucleic acids
SA Shelke, ST Sigurdsson - Modified Nucleic Acids, 2016 - Springer
… determination of accurate distances in addition to orientations between two spin labels. This
chapter gives an overview of nucleic acids spin labeling … spin-labeling method for RNA is the …
chapter gives an overview of nucleic acids spin labeling … spin-labeling method for RNA is the …
High-yield spin labeling of long RNAs for electron paramagnetic resonance spectroscopy
… of biomacromolecules such as RNA. Here we introduce a spin labeling strategy based on
click … To determine the appropriate conformation for the two Gaussian components, the X-ray …
click … To determine the appropriate conformation for the two Gaussian components, the X-ray …
Synthesis of DNA and RNA containing rigid spin-and fluorescent labels for studies by EPR and fluorescence spectroscopies
ALJ Segler - 2021 - opinvisindi.is
… problem associated with spin-labeling by chemical synthesis of … label Çm into RNA with
quantitative spin-labeling efficiency. … and their spin labeling efficiency was determined by spin-…
quantitative spin-labeling efficiency. … and their spin labeling efficiency was determined by spin-…
Advancement of covalent and noncovalent nitroxide spin-labeling of RNA
S Saha - 2017 - opinvisindi.is
… determined by fluorescence titration studies. This spin-labeling approach is the first example
of … and site-directed spin-labeling that involves a native (unmodified) RNA. Pulsed electron-…
of … and site-directed spin-labeling that involves a native (unmodified) RNA. Pulsed electron-…
Impact of spin label rigidity on extent and accuracy of distance information from PRE data
KA Schnorr, DB Gophane, C Helmling… - Journal of Biomolecular …, 2017 - Springer
… We determined PRE rates obtained from aromatic 13 C … directed spin labeling methods and
their application for RNA, … Here, we apply a previously established noncovalent spin labeling …
their application for RNA, … Here, we apply a previously established noncovalent spin labeling …
Advancements in site-directed incorporation of rigid spin-labels into nucleic acids
HY Júlíusson - 2020 - opinvisindi.is
… in nitroxide spin-labeling of nucleic acids for structure determination using rigid … spin-labeling
of duplex DNA and RNA containing abasic sites. No specific binding was observed for RNA…
of duplex DNA and RNA containing abasic sites. No specific binding was observed for RNA…
Preparation of site-specifically spin-labeled RNA by in vitro transcription using an expanded genetic alphabet
L Bornewasser, S Kath-Schorr - DNAzymes: Methods and Protocols, 2022 - Springer
… Depending on the desired positions for spin labeling within the RNA sequence of interest, …
Determine the concentration of cleaned spin-labeled RNA by measuring the absorption at …
Determine the concentration of cleaned spin-labeled RNA by measuring the absorption at …
NMR solution structure determination of large RNA-protein complexes
DK Yadav, PJ Lukavsky - Progress in nuclear magnetic resonance …, 2016 - Elsevier
… the ssRNA sequence only affected residues which do not display base-specific recognition.
… ], with spin labeling in different positions for EPR measurements or with spin labeling and …
… ], with spin labeling in different positions for EPR measurements or with spin labeling and …