CHARMM‐GUI, http://www. charmm-gui. org, is a web‐based graphical user interface that
prepares complex biomolecular systems for molecular simulations. CHARMM‐GUI creates
input files for a number of programs including CHARMM, NAMD, GROMACS, AMBER,
GENESIS, LAMMPS, Desmond, OpenMM, and CHARMM/OpenMM. Since its original
development in 2006, CHARMM‐GUI has been widely adopted for various purposes and
now contains a number of different modules designed to set up a broad range of …

CHARMM-GUI, http://www. charmm-gui. org, is a web-based graphical user interface to
prepare complex molecular simulation systems and input files (CHARMM, NAMD,
GROMACS, AMBER, OpenMM, CHARMM/OpenMM) to facilitate the usage of common and
advanced simulation techniques. Since its original development in 2006, CHARMM-GUI has
been widely adopted for various purposes and now contains a number of different modules
designed to setup a broad range of simulations: PDB Reader & Manipulator for reading PDB …