Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours
… and mutational signature activities was computed by using robust … Each capture site was
imaged using a Leica inverted … All samples were loaded with the Access Array loader and …
imaged using a Leica inverted … All samples were loaded with the Access Array loader and …
Detecting cell-of-origin and cancer-specific methylation features of cell-free DNA from Nanopore sequencing
E Katsman, S Orlanski, F Martignano, I Fox-Fisher… - Genome Biology, 2022 - Springer
… -genome approaches that capture multiple genomic features … This was based on the same
array-based MethAtlas samples … are anonymous BAM files which do not contain any genetic …
array-based MethAtlas samples … are anonymous BAM files which do not contain any genetic …
[PDF][PDF] Integrated molecular characterization of testicular germ cell tumors
… Using cell-type DNA methylation signatures, we identified … axis) versus mutation and SNP
array-based (ABSOLUTE) tumor … (B) A multiple platform characterization of KIT and KIT ligand …
array-based (ABSOLUTE) tumor … (B) A multiple platform characterization of KIT and KIT ligand …
Circulating tumor DNA reveals complex biological features with clinical relevance in metastatic breast cancer
A Prat, F Brasó-Maristany, O Martínez-Sáez… - Nature …, 2023 - nature.com
… to use DNA sequencing of ctDNA in blood to capture … Here, we hypothesized that (1)
DNA-based signatures tracking … in ctDNA using a multi-class significance analysis of microarrays (…
DNA-based signatures tracking … in ctDNA using a multi-class significance analysis of microarrays (…
[PDF][PDF] Multilevel genomics-based taxonomy of renal cell carcinoma
… Our nine major genomic subtypes may not necessarily capture … the gene signature scores
to standard deviations from the … We took the intersection of Illumina array probes shared …
to standard deviations from the … We took the intersection of Illumina array probes shared …
Public data and open source tools for multi-assay genomic investigation of disease
… of cell lines helps to capture genomic heterogeneity underlying … The most common tool used
has been the SNP array, but … patient's anonymity and matching patient's consent to the use …
has been the SNP array, but … patient's anonymity and matching patient's consent to the use …
A graph-based genome and pan-genome variation of the model plant Setaria
… To capture the full spectrum of genetic diversity of Setaria … screened for genome-wide
selection signatures associated … tissues and sequenced by the NovaSeq 6000 platform. For …
selection signatures associated … tissues and sequenced by the NovaSeq 6000 platform. For …
Age estimation with DNA: from forensic DNA fingerprinting to forensic (epi) genomics: a mini-review
W Parson - Gerontology, 2018 - karger.com
… can be translated into a simple array of numbers and is easily … -wide techniques to capture
and quantify this information … the manuscript and 3 anonymous reviewers for useful comments. …
and quantify this information … the manuscript and 3 anonymous reviewers for useful comments. …
Recurrent and functional regulatory mutations in breast cancer
… alterations, and mutational signatures have been extensively … to array design, coverage,
and fraction of variant alleles were … regions of most exome capture platforms, in approximate …
and fraction of variant alleles were … regions of most exome capture platforms, in approximate …
A multiplex reverse transcription PCR and automated electronic microarray assay for detection and differentiation of seven viruses affecting swine
A Erickson, M Fisher… - Transboundary and …, 2018 - Wiley Online Library
… or absence of a large number of genetic signatures. However, most … microarray platform that
integrates and automates capture probe … Sandor Dudas, and two anonymous reviewers for …
integrates and automates capture probe … Sandor Dudas, and two anonymous reviewers for …