Genome-wide DNA methylation profiling in zebrafish
… DNA methylation in mammals. Here we briefly review the zebrafish model for studying DNA
methylation and describe a series of methods for performing genome-wide DNA methylation …
methylation and describe a series of methods for performing genome-wide DNA methylation …
[HTML][HTML] DNA Methylation Profiles of Tph1A and BDNF in Gut and Brain of L. Rhamnosus-Treated Zebrafish
M Cuomo, L Borrelli, R Della Monica, L Coretti… - Biomolecules, 2021 - mdpi.com
… In order to investigate whether probiotic treatment may have an impact on DNA methylation
in gut and brain cells, we took advantage of a Zebrafish experimental model previously …
in gut and brain cells, we took advantage of a Zebrafish experimental model previously …
[HTML][HTML] Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic acid
AC Adam, KK Lie, P Whatmore, LM Jakt, M Moren… - PLoS …, 2019 - journals.plos.org
… The gene expression data was obtained from a different cohort of zebrafish than the DNA
methylation data, though the experimental treatment was the same as for the zebrafish in this …
methylation data, though the experimental treatment was the same as for the zebrafish in this …
Sex-specific transcription and DNA methylation profiles of reproductive and epigenetic associated genes in the gonads and livers of breeding zebrafish
… Here we report for the first time sexually dimorphic DNA methylation profiles, and associations
between transcription and DNA methylation in the promoters of esr1, amh and dnmt1, …
between transcription and DNA methylation in the promoters of esr1, amh and dnmt1, …
[HTML][HTML] Unraveling the whole genome DNA methylation profile of zebrafish kidney marrow by Oxford Nanopore sequencing
… ), the ONT-based methylation profiling can cover more CpG sites (… And the ONT methylation
calling results showed a high … a comprehensive methylation profile for zebrafish KM, paving …
calling results showed a high … a comprehensive methylation profile for zebrafish KM, paving …
Genomic responses of DNA methylation and transcript profiles in zebrafish cells upon nutrient deprivation stress
X Fan, T Hou, Y Guan, X Li, S Zhang, Z Wang - Science of The Total …, 2020 - Elsevier
… In the present study, we advanced knowledge and understanding of the zebrafish cell
methylome using WGBS to show the genome-wide coalition analyses of DNA methylation and …
methylome using WGBS to show the genome-wide coalition analyses of DNA methylation and …
[HTML][HTML] A DNA methylation age predictor for zebrafish
B Mayne, D Korbie, L Kenchington, B Ezzy… - Aging (Albany …, 2020 - ncbi.nlm.nih.gov
… we identify DNA methylation biomarkers that accurately predict the age of zebrafish from
caudal fin … measurement of DNA methylation to estimate age with high accuracy and precision. …
caudal fin … measurement of DNA methylation to estimate age with high accuracy and precision. …
DNA methylation and gene expression alterations in zebrafish early-life stages exposed to the antibacterial agent triclosan
E Falisse, B Ducos, PA Stockwell, IM Morison… - Environmental …, 2018 - Elsevier
… of 171 differentially methylated fragments were identified by … mRNA levels and DNA
methylation patterns in introns, … Triclosan alters DNA methylation in zebrafish exposed during …
methylation patterns in introns, … Triclosan alters DNA methylation in zebrafish exposed during …
[HTML][HTML] Comparative epigenomic profiling of the DNA methylome in mouse and zebrafish uncovers high interspecies divergence
… We propose that the high level of DNA methylation in zebrafish is a consequence of this
TE-enriched genome and CpG islands, as a mechanism of limiting transposition. Indeed, we find …
TE-enriched genome and CpG islands, as a mechanism of limiting transposition. Indeed, we find …
Role of DNA methylation in altered gene expression patterns in adult zebrafish (Danio rerio) exposed to 3, 3', 4, 4', 5-pentachlorobiphenyl (PCB 126)
N Aluru, SI Karchner, KS Krick, W Zhu… - Environmental …, 2018 - academic.oup.com
… changes in DNA methylation concomitant with gene expression patterns in the liver and
brain tissues of zebrafish exposed to PCB126. We hypothesized that DNA methylation changes …
brain tissues of zebrafish exposed to PCB126. We hypothesized that DNA methylation changes …
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