Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration
V Begley, A Jordán-Pla, X Peñate… - RNA biology, 2021 - Taylor & Francis
… large C-terminal moiety is not directly involved in nuclease activity. … transcription elongation
that are compatible with either increased RNA pol II processivity or decreased elongation rate…
that are compatible with either increased RNA pol II processivity or decreased elongation rate…
Termination of transcription by RNA polymerase II: BOOM!
JD Eaton, S West - Trends in Genetics, 2020 - cell.com
… II stranded on the template and easily terminated by XRN2, which degrades the
polymerase-associated product of PAS cleavage. Abbreviations: CPA, cleavage and …
polymerase-associated product of PAS cleavage. Abbreviations: CPA, cleavage and …
Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity
JD Eaton, L Davidson, DLV Bauer… - Genes & …, 2018 - genesdev.cshlp.org
… degradation of 3′ flanking region RNA and transcriptional termination. This defect is …
elongating transcript sequencing (mNET-seq). An Xrn2 effect on termination requires prior RNA …
elongating transcript sequencing (mNET-seq). An Xrn2 effect on termination requires prior RNA …
[HTML][HTML] Recent advances in understanding transcription termination by RNA polymerase II
… Xrn2 torpedo chases the elongating polymerase while Xrn2 … effects of Rat1 are necessary
for efficient pol II release in yeast. … The transcription elongation complex has been of interest to …
for efficient pol II release in yeast. … The transcription elongation complex has been of interest to …
… influences RNA pol II-dependent transcription elongation rates across the yeast genome and this control is particularly relevant for late elongation of regulatory genes
V Begley, A Jordán-Pla, X Peñate, AI Garrido-Godino… - bioRxiv, 2020 - biorxiv.org
… We found significant effects of Xrn1 perturbation on RNA pol … and the activity of the Rat1
(Xrn2) exonuclease (see 12, 13 for … C-terminal moiety is not directly involved in nuclease activity. …
(Xrn2) exonuclease (see 12, 13 for … C-terminal moiety is not directly involved in nuclease activity. …
Causes and consequences of RNA polymerase II stalling during transcript elongation
M Noe Gonzalez, D Blears, JQ Svejstrup - Nature reviews Molecular …, 2021 - nature.com
… of RNA polymerase II (Pol II) as it transcribes a gene is anything but a smooth ride. Transcript
elongation … , nucleosomes, RNA secondary structures and the underlying DNA sequence. …
elongation … , nucleosomes, RNA secondary structures and the underlying DNA sequence. …
XRN2 links transcription termination to DNA damage and replication stress
JC Morales, P Richard, PL Patidar, EA Motea… - PLoS …, 2016 - journals.plos.org
… in some cases RNA polymerase II (RNAPII) transcription regulation … following XRN2 depletion
might underlie the effects we have … R loops formed during transcriptional elongation and/or …
might underlie the effects we have … R loops formed during transcriptional elongation and/or …
Transcriptional termination in mammals: Stopping the RNA polymerase II juggernaut
NJ Proudfoot - Science, 2016 - science.org
… transcript by Xrn2 up to the arrested Pol II (57). In effect, these experiments argue that the act
of removing RNA up to or into the … Early transcription elongation is restricted by two negative …
of removing RNA up to or into the … Early transcription elongation is restricted by two negative …
The role of RNA Polymerase II-dependent transcription elongation in the cross-talk between mRNA synthesis and decay.
VS Begley - 2018 - idus.us.es
… Transcription of the eukaryotic genome is carried out by the nuclear RNA polymerase I (Pol
I), Pol II and Pol III. … Factor b) mediated counteraction of the negative effects of DSIF (DRB …
I), Pol II and Pol III. … Factor b) mediated counteraction of the negative effects of DSIF (DRB …
Born to run: control of transcription elongation by RNA polymerase II
FX Chen, ER Smith, A Shilatifard - Nature reviews Molecular cell …, 2018 - nature.com
… are subject to degradation by nucleases such as 5′-3′ exoribonuclease 2 (XRN2), which
… II pausing following a long period of selection, which could include many indirect effects of …
… II pausing following a long period of selection, which could include many indirect effects of …