Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration

V Begley, A Jordán-Pla, X Peñate… - RNA biology, 2021 - Taylor & Francis
… large C-terminal moiety is not directly involved in nuclease activity. … transcription elongation
that are compatible with either increased RNA pol II processivity or decreased elongation rate

Termination of transcription by RNA polymerase II: BOOM!

JD Eaton, S West - Trends in Genetics, 2020 - cell.com
… II stranded on the template and easily terminated by XRN2, which degrades the
polymerase-associated product of PAS cleavage. Abbreviations: CPA, cleavage and …

Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity

JD Eaton, L Davidson, DLV Bauer… - Genes & …, 2018 - genesdev.cshlp.org
… degradation of 3′ flanking region RNA and transcriptional termination. This defect is …
elongating transcript sequencing (mNET-seq). An Xrn2 effect on termination requires prior RNA

[HTML][HTML] Recent advances in understanding transcription termination by RNA polymerase II

TJ Loya, D Reines - F1000Research, 2016 - ncbi.nlm.nih.gov
Xrn2 torpedo chases the elongating polymerase while Xrn2effects of Rat1 are necessary
for efficient pol II release in yeast. … The transcription elongation complex has been of interest to …

… influences RNA pol II-dependent transcription elongation rates across the yeast genome and this control is particularly relevant for late elongation of regulatory genes

V Begley, A Jordán-Pla, X Peñate, AI Garrido-Godino… - bioRxiv, 2020 - biorxiv.org
… We found significant effects of Xrn1 perturbation on RNA pol … and the activity of the Rat1
(Xrn2) exonuclease (see 12, 13 for … C-terminal moiety is not directly involved in nuclease activity. …

Causes and consequences of RNA polymerase II stalling during transcript elongation

M Noe Gonzalez, D Blears, JQ Svejstrup - Nature reviews Molecular …, 2021 - nature.com
… of RNA polymerase II (Pol II) as it transcribes a gene is anything but a smooth ride. Transcript
elongation … , nucleosomes, RNA secondary structures and the underlying DNA sequence. …

XRN2 links transcription termination to DNA damage and replication stress

JC Morales, P Richard, PL Patidar, EA Motea… - PLoS …, 2016 - journals.plos.org
… in some cases RNA polymerase II (RNAPII) transcription regulation … following XRN2 depletion
might underlie the effects we have … R loops formed during transcriptional elongation and/or …

Transcriptional termination in mammals: Stopping the RNA polymerase II juggernaut

NJ Proudfoot - Science, 2016 - science.org
transcript by Xrn2 up to the arrested Pol II (57). In effect, these experiments argue that the act
of removing RNA up to or into the … Early transcription elongation is restricted by two negative …

The role of RNA Polymerase II-dependent transcription elongation in the cross-talk between mRNA synthesis and decay.

VS Begley - 2018 - idus.us.es
Transcription of the eukaryotic genome is carried out by the nuclear RNA polymerase I (Pol
I), Pol II and Pol III. … Factor b) mediated counteraction of the negative effects of DSIF (DRB …

Born to run: control of transcription elongation by RNA polymerase II

FX Chen, ER Smith, A Shilatifard - Nature reviews Molecular cell …, 2018 - nature.com
… are subject to degradation by nucleases such as 5′-3′ exoribonuclease 2 (XRN2), which
… II pausing following a long period of selection, which could include many indirect effects of …