Electron Paramagnetic Resonance Characterization of the Triheme Cytochrome from Geobacter sulfurreducens

N Ponomarenko, J Niklas, PR Pokkuluri… - Biochemistry, 2018 - ACS Publications
N Ponomarenko, J Niklas, PR Pokkuluri, O Poluektov, DM Tiede
Biochemistry, 2018ACS Publications
Periplasmic cytochrome A (PpcA) is a representative of a broad class of multiheme
cytochromes functioning as protein “nanowires” for storage and extracellular transfer of
multiple electrons in the δ-proteobacterium Geobacter sulfurreducens. PpcA contains three
bis-His coordinated hemes held in a spatial arrangement that is highly conserved among the
multiheme cytochromes c3 and c7 families, carries low potential hemes, and is notable for
having one of the lowest number of amino acids utilized to maintain a characteristic protein …
Periplasmic cytochrome A (PpcA) is a representative of a broad class of multiheme cytochromes functioning as protein “nanowires” for storage and extracellular transfer of multiple electrons in the δ-proteobacterium Geobacter sulfurreducens. PpcA contains three bis-His coordinated hemes held in a spatial arrangement that is highly conserved among the multiheme cytochromes c3 and c7 families, carries low potential hemes, and is notable for having one of the lowest number of amino acids utilized to maintain a characteristic protein fold and site-specific heme function. Low temperature X-band electron paramagnetic resonance (EPR) spectroscopy has been used to characterize the electronic configuration of the Fe(III) and the ligation mode for each heme. The three sets of EPR signals are assigned to individual hemes in the three-dimensional crystal structure. The relative energy levels of the Fe(III) 3d orbitals for individual hemes were estimated from the principal g-values. The observed g-tensor anisotropy was used as a probe of electronic structure of each heme, and differences were determined by specifics of axial ligation. To ensure unambiguous assignment of highly anisotropic low-spin (HALS) signal to individual hemes, EPR analyses of iron atom electronic configurations have been supplemented with investigation of porphyrin macrocycles by one-dimensional 1H NMR chemical shift patterns for the methyl substituents. Within optimized geometry of hemes in PpcA, the magnetic interactions between hemes were found to be minimal, similar to the c3 family of tetraheme cytochromes.
ACS Publications
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