[HTML][HTML] Dissecting endophytic lifestyle along the parasitism/mutualism continuum in Arabidopsis

PH Fesel, A Zuccaro - Current Opinion in Microbiology, 2016 - Elsevier
… Initial efforts have been taken to decipher the genetic basis of … genomic features of the
Arabidopsis thaliana root endophytic … Additionally the plant transcriptome changes are examined …

Transcriptomic and metabolomic approaches deepen our knowledge of plant–endophyte interactions

X Chen, M Sun, S Chong, J Si, L Wu - Frontiers in Plant Science, 2022 - frontiersin.org
… relationships of endophytes living in plants ranges from mutualistic, where … genome
and transcriptome analyses in tandem is more helpful for decoding the nature of plant–endophyte

[HTML][HTML] Endophytism or saprophytism: decoding the lifestyle transition of the generalist fungus Phomopsis liquidambari

J Zhou, X Li, PW Huang, CC Dai - Microbiological Research, 2018 - Elsevier
… Here, the transcriptome features of generalist P. liquidambari … Zuccaro et al. reported that the
genome of the root endophyte … mechanisms of endophyte-host mutualism and endophytism-…

“Omics” tools for better understanding the plant–endophyte interactions

S Kaul, T Sharma, M K. Dhar - Frontiers in plant science, 2016 - frontiersin.org
… -endophytic groups of the plant microbiome, life strategies of … manipulation of the mutualistic
association between the two. … transcriptome analysis of endophyte free and endophyte

[HTML][HTML] Plant-microbial endophytes interactions: scrutinizing their beneficial mechanisms from genomic explorations

M del Carmen Orozco-Mosqueda, G Santoyo - Current Plant Biology, 2021 - Elsevier
… -endophyte interactions is complex and difficult to decipher. … On the other hand, systemic
endophytes are mutualists that … by transcriptome analysis. The authors sequenced the entire …

Exploring the benefits of endophytic fungi via omics

H Chetia, D Kabiraj, B Bharali, S Ojha… - Advances in endophytic …, 2019 - Springer
… for genomics, metagenomics, transcriptomics, proteomics and metabolomics of endophytic
… Thus, endophyte–host plant relationship is a defensive mutualistic relationship marked by …

An ecological insight into the multifaceted world of plant-endophyte association

S Mishra, A Bhattacharjee, S Sharma - Critical Reviews in Plant …, 2021 - Taylor & Francis
… The researchers carried out rice root transcriptome analysis post-infection with pathogenic
(… genome sequencing of various endophytic and mutualistic bacteria, it could be deciphered

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

E Martino, E Morin, GA Grelet, A Kuo, A Kohler… - New …, 2018 - Wiley Online Library
… saprotrophy to the mycorrhizal habit, or a versatile life strategy similar to fungal endophytes.
life strategies. We further compared the transcriptomes of O. maius, M. bicolor and R. …

Endophytism: a multidimensional approach to plant–prokaryotic microbe interaction

S Rani, P Kumar, P Dahiya, R Maheshwari… - Frontiers in …, 2022 - frontiersin.org
… /DAMP signals to identify the mutualistic signals. However, … Metagenomics and transcriptomics
in particular are proving … The endophytic diversity and detailed analysis of endophytic

De novo Transcriptome Assembly of Phomopsis liquidambari Provides Insights into Genes Associated with Different Lifestyles in Rice (Oryza sativa L.)

J Zhou, X Li, Y Chen, CC Dai - Frontiers in Plant Science, 2017 - frontiersin.org
Analysis of DEGs between saprophytic and endophytic lifestyles … and mutualism in a single
plant species to directly compare … investigated the molecular genome of endophytes in vivo, …