Expression patterns and functional divergence of homologous genes accompanied by polyploidization in cotton (Gossypium hirsutum L.)
Z Peng, H Cheng, G Sun, Z Pan, X Wang… - Science China Life …, 2020 - Springer
… Specifically, ELD-A/D and homologous expression bias in the allopolyploid cotton were …
Geneexpression novelty in allopolyploid cotton: a proteomic perspective. Genetics 200, 91–…
Geneexpression novelty in allopolyploid cotton: a proteomic perspective. Genetics 200, 91–…
Cotton as a model for polyploidy and fiber development study
VS Kamburova, IB Salakhutdinov… - Model Organisms in …, 2021 - books.google.com
… gene expression in both At-and Dt-subgenome [1, 40, 48, 55]. Despite the fact that major
genes for fiber quality were introduced into allopolyploids … The results of the study of proteome …
genes for fiber quality were introduced into allopolyploids … The results of the study of proteome …
Transgressive and subgenome expression level dominance and co-expression network analyses at the early fiber development in allopolyploid Gossypium
… and proteome sequencing to characterize the gene expression … From a global perspective,
our findings were in line with those of … cotton species and integrated global gene expression …
our findings were in line with those of … cotton species and integrated global gene expression …
[HTML][HTML] An insight into the gene expression evolution in Gossypium species based on the leaf transcriptomes
Y Wu, R Sun, T Huan, Y Zhao, D Yu, Y Sun - BMC genomics, 2024 - Springer
… This phenomenon was similar to a previous proteomics analysis in cotton fiber, which
showed that the fiber proteomes of AD 1 and AD 2 were closely related to the parental A- and D-…
showed that the fiber proteomes of AD 1 and AD 2 were closely related to the parental A- and D-…
Polyploidy and the proteome
… of shifts in gene content, alterations in gene expression, and … Allopolyploidy can result in
gene expression changes relative to … proteomic evolutionary implications (eg, additivity, novelty, …
gene expression changes relative to … proteomic evolutionary implications (eg, additivity, novelty, …
[HTML][HTML] Comparative proteomic analyses of Asian cotton ovules with attached fibers in the early stages of fiber elongation process
B Zhang, SJ Du, J Hu, D Miao, JY Liu - Proteome Science, 2016 - Springer
… comparative proteomic approach to profile dynamic proteomes of diploid Asian cotton ovules
with … the first evidence that the two allopolyploid species have achieved superficially similar …
with … the first evidence that the two allopolyploid species have achieved superficially similar …
Homoeologs in Allopolyploids: Navigating Redundancy as Both an Evolutionary Opportunity and a Technical Challenge-A Transcriptomics Perspective
G Aufiero, C Fruggiero, D D'Angelo, N D'Agostino - 2024 - preprints.org
… novelties, and environmental adaptations exhibited by … genome dominance in allopolyploid
cotton were conducted … to define gene expression profiles in allopolyploids and appropriately …
cotton were conducted … to define gene expression profiles in allopolyploids and appropriately …
Extensive changes in gene expression and alternative splicing due to homoeologous exchange in rice segmental allopolyploids
… to rapidly generate novelty in gene expression and … allopolyploids and relevant to allopolyploid
crop breeding. … regulating gene expression and generates transcriptome and proteome …
crop breeding. … regulating gene expression and generates transcriptome and proteome …
Evolutionary dynamics of chromatin structure and duplicate gene expression in diploid and allopolyploid cotton
… also alter epigenetic dynamics, gene expression, the proteome, and molecular networks. …
regulation in allopolyploid cotton. Taken together, our study provides a detailed view of the …
regulation in allopolyploid cotton. Taken together, our study provides a detailed view of the …
Homoeologous gene expression and co-expression network analyses and evolutionary inference in allopolyploids
… gene expression and co-expression networks. A ground-truth, in silico dataset of allopolyploid
cotton (AD) … This approach allowed us to evaluate the accuracy of ‘homoeolog’ expression …
cotton (AD) … This approach allowed us to evaluate the accuracy of ‘homoeolog’ expression …