Patterns of genomic diversity and linkage disequilibrium across the disjunct range of the Australian forest tree Eucalyptus globulus

JB Butler, JS Freeman, BM Potts… - … Genetics & Genomes, 2022 - Springer
… globulus, but access to a more extensive set of markers would allow finer-scale … individuals
from geographically neighbouring races, with the exception of FURN which shows very little …

Variation in linked selection and recombination drive genomic divergence during allopatric speciation of European and American aspens

J Wang, NR Street, DG Scofield… - Molecular Biology and …, 2016 - academic.oup.com
… is not unexpected given the large geographical distance and … genomic background averages,
both d xy and RND revealed … ), and stronger signals of linkage disequilibrium (LD) (higher …

[HTML][HTML] Genomic population structure and local adaptation of the wild strawberry Fragaria nilgerrensis

Y Hu, C Feng, L Yang, PP Edger… - Horticulture Research, 2022 - academic.oup.com
… from 28 geographical populations to obtain genome-wide … the considerable contribution of
geographic isolation to genetic … <5% and performed a linkage disequilibrium (LD)-based SNP …

Inferring the Genomic Landscape of Recombination Rate Variation in European Aspen (Populus tremula)

RP Apuli, C Bernhardsson, B Schiffthaler… - … : Genes, Genomes …, 2020 - academic.oup.com
… rates based on linkage disequilibrium in a large number of … Such extensive geographic
distribution means P. tremula has … The left panel shows the marker distribution (in cM) for the …

Estimating scale-specific and localized spatial patterns in allele frequency

JR Lasky, M Takou, D Gamba, TH Keitt - Genetics, 2024 - academic.oup.com
… thaliana to characterize population structure and identify locally … a flexible way to reveal
geographic patterns and underlying … in nature and having extensive theory for the underlying …

Broad-scale puma connectivity could restore genomic diversity to fine-scale coastal populations

KD Gustafson, RB Gagne, MR Buchalski, TW Vickers… - bioRxiv, 2021 - biorxiv.org
… samples from across a large geographic area so libraries … linkage disequilibrium on
16,285 SNPs from 401 pumas throughout California demonstrated that the complex geography

Exome Resequencing Reveals Evolutionary History, Genomic Diversity, and Targets of Selection in the Conifers Pinus taeda and Pinus elliottii

JJ Acosta, AM Fahrenkrog, LG Neves… - Genome biology and …, 2019 - academic.oup.com
Extensive similarities were revealed between these species: both species feature rapid linkage
disequilibrium … number of individuals sampled across geographic locations was limited, it …

Population genetic differentiation and genomic signatures of adaptation to climate in an abundant lizard

M Ruiz Miñano, GM While, W Yang, CP Burridge… - Heredity, 2022 - nature.com
… , yet there is extensive phenotypic variation across climatic … for genetic structure according
to climate and geography, … the 415 individuals with respect to linkage disequilibrium (LD). To …

Physical geography, isolation by distance and environmental variables shape genomic variation of wild barley (Hordeum vulgare L. ssp. spontaneum) in the …

CW Chang, E Fridman, M Mascher, A Himmelbach… - Heredity, 2022 - nature.com
… We aimed to (1) describe the population structure of wild barley … In our data, EEMS revealed
fine-scale patterns of gene flow … a small geographical range like in our case and over a large

Genome resequencing reveals demographic history and genetic architecture of seed salinity tolerance in Populus euphratica

H Jia, G Liu, J Li, J Zhang, P Sun, S Zhao… - Journal of …, 2020 - academic.oup.com
… euphratica should be extensively explored. To … We compared the pattern of linkage
disequilibrium (LD) using the … distinct clades exhibited strong geographical distribution patterns in …