Genomic analysis of trimethoprim-resistant extraintestinal pathogenic Escherichia coli and recurrent urinary tract infections

D Li, CJ Reid, T Kudinha, VM Jarocki… - Microbial …, 2020 - microbiologyresearch.org
… Two MDS analyses were performed, one for identified virulence genes and one for AMR
genes, using the standard R package functions dist and cmdscale in conjunction with a …

Identification and characterisation of fosfomycin resistance in Escherichia coli urinary tract infection isolates from Australia

…, P Collignon, S Bradbury, E Colombi… - International journal of …, 2020 - Elsevier
… , we identified the fosA4 gene in the fosfomycin-resistant E. … gene identified in this study
was located on a 3.5-kb genetic island that is likely to be involved in the spread of the fosA4 gene

Characterization of antibiotic resistance and virulence factors of Escherichia coli strains isolated from Iranian inpatients with urinary tract infections

M Haghighatpanah, A Mojtahedi - Infection and Drug Resistance, 2019 - Taylor & Francis
… and virulence genes among Escherichia coli strains isolated from UTIs in the north of Iran. …
coli isolates were identified by standard microbiologic tests. Antimicrobial susceptibility …

Bacterial virulence phenotypes of Escherichia coli and host susceptibility determine risk for urinary tract infections

HL Schreiber IV, MS Conover, WC Chou… - Science translational …, 2017 - science.org
… In contrast to many enteric E. coli pathogroups, no genetic signature has been identified for
… After correcting for false discovery, we identified a total of 42 core genes whose expression …

Enteroaggregative Escherichia coli is associated with antibiotic resistance and urinary tract infection symptomatology

VI Martínez-Santos, M Ruíz-Rosas, A Ramirez-Peralta… - PeerJ, 2021 - peerj.com
… PCRs were performed in order to determine the phylogenetic group and to detect the virulence
genes of each isolate. One of the isolates was identified as E. albertii, so it was discarded…

Escherichia coli Causing Recurrent Urinary Tract Infections: Comparison to Non-Recurrent Isolates and Genomic Adaptation in Recurrent Infections

KL Nielsen, M Stegger, K Kiil, B Lilje, K Ejrnæs… - Microorganisms, 2021 - mdpi.com
urinary tract infections by comparative analyses of recurrent and non-recurrent Escherichia
coli … We identified several genes which were more common in rUTI isolates, including nine …

Drug resistance and integron genes in Escherichia coli isolated from urinary tract infection

M Chen, Y Wu, S Yu, S Liu, Y Wang… - … of nanoscience and …, 2019 - ingentaconnect.com
… It should be recognized that the four antibioticresistance genes identified in the present study
do not represent the entire repertoire of resistance genes that can be found in E. coli. Most …

… , Virulence Factor-encoding Genes and Antibiotic Resistance of Escherichia coli, Causing Urinary Tract Infections and Other Extraintestinal Infections in Humans in …

SC Flament-Simon, MH Nicolas-Chanoine, V García… - Antibiotics, 2020 - mdpi.com
… Using the fimH allele type, we identified six fimH alleles among our 23 ST73 isolates (…
associated to different fimH alleles and serotypes. In the present study, we have also identified five …

[HTML][HTML] E. coli catheter-associated urinary tract infections are associated with distinctive virulence and biofilm gene determinants

Z Zou, RF Potter, WH McCoy, JA Wildenthal… - JCI insight, 2023 - ncbi.nlm.nih.gov
… to identify strain-specific characteristics associated with the … To identify coassociations
between the 46 genes associated … modularity-based community detection using the Louvain …

Molecular typification of Escherichia coli from community-acquired urinary tract infections in Mexico

…, RM Ribas-Aparicio, E González-Villalobos… - International Journal of …, 2022 - Elsevier
coli O25b-ST131 clone was identified in 32% of the strains assigned to the … genes encoding
adhesin components, iron-acquisition systems, toxins, and pathogenicity-associated islands …