[HTML][HTML] Best practices in designing, sequencing, and identifying random DNA barcodes
… We conclude this section with a brief discussion of “pre-multiplexing,” a way of leveraging …
is that any sufficiently large population harbors beneficial genetic variation, even prior to the …
is that any sufficiently large population harbors beneficial genetic variation, even prior to the …
[PDF][PDF] Structural variant detection in region-based phased diploid assemblies from linked-reads
C Luo, X Zhou - The International symposium on bioinformatics …, 2021 - lab.vanderbilt.edu
… and other applications through highly-multiplexed genome … Structural variants (SVs)
represent large genomic variations … process since it divides barcoded reads into two different …
represent large genomic variations … process since it divides barcoded reads into two different …
[HTML][HTML] Single-cell barcode analysis provides a rapid readout of cellular signaling pathways in clinical specimens
… Multiplexed imaging of cells adhered to glass slides has … decided to utilize DNA bar-coded
antibodies where the hybridized … The objective of this research was to develop a multiplexed …
antibodies where the hybridized … The objective of this research was to develop a multiplexed …
Cellular barcoding: lineage tracing, screening and beyond
JM Kebschull, AM Zador - Nature methods, 2018 - nature.com
… detection of nucleic acids to the detection of barcodes. Recently, the MEMOIR method 4 was
used with highly multiplexed … Similarly, multiplexed FISH was used to register live images of …
used with highly multiplexed … Similarly, multiplexed FISH was used to register live images of …
pBACode: a random-barcode-based high-throughput approach for BAC paired-end sequencing and physical clone mapping
… We extracted barcodes and genomic sequences from read pairs using in-house Perl … -determination
gene. Japanese flounder and three-spine stickleback use an XY sex determination …
gene. Japanese flounder and three-spine stickleback use an XY sex determination …
The continuing evolution of barcode applications: Functional toxicology to cell lineage
M Fasullo, M Dolan - Experimental Biology and Medicine, 2022 - journals.sagepub.com
… using signature-tagged mutagenesis (STM). Pertinent to the focus of this review is the use of
barcoding to identify … Multiplexing allows for multiple conditions to be tested individually and …
barcoding to identify … Multiplexing allows for multiple conditions to be tested individually and …
Fast and accurate alignment of barcoded reads
AAR Shajii - 2018 - dspace.mit.edu
… As we usher in the next wave of next-generation sequencing technologies, barcoded read
sequencing will undoubtedly play a central role, and fast and accurate methods for aligning …
sequencing will undoubtedly play a central role, and fast and accurate methods for aligning …
Genetic mutation analysis of Parkinson's disease patients using multigene next-generation sequencing panels
A Gorostidi, JF Martí-Massó, A Bergareche… - Molecular diagnosis & …, 2016 - Springer
… genetic analysis of a PD cohort, we designed a multiplex, … sequencing 92 PD samples and
identified genetic variants in 15 PD-associated genes that were selected according to genetic …
identified genetic variants in 15 PD-associated genes that were selected according to genetic …
Large-scale targeted sequencing comparison highlights extreme genetic heterogeneity in nephronophthisis-related ciliopathies
M Schueler, J Halbritter, IG Phelps, DA Braun… - … of medical genetics, 2016 - jmg.bmj.com
… Next, four sets of 96 bar-coded sample libraries were pooled, and each was purified using
1.8… Combined with our previous mutation analysis using an array-based microfluidic multiplex …
1.8… Combined with our previous mutation analysis using an array-based microfluidic multiplex …
[HTML][HTML] Korean society for genetic diagnostics guidelines for validation of next-generation sequencing-based somatic variant detection in hematologic malignancies
H Kim, JW Yun, ST Lee, HJ Kim… - Annals of Laboratory …, 2019 - synapse.koreamed.org
… of gene variants is also a major criterion for the diagnosis of hematologic malignancies [7].
The importance of the accurate detection of specific gene variants has … separately bar-coded …
The importance of the accurate detection of specific gene variants has … separately bar-coded …