Common genomic elements promote transcriptional and DNA replication roadblocks
K Roy, J Gabunilas, A Gillespie, D Ngo… - Genome …, 2016 - genome.cshlp.org
… Recent work demonstrated existence of a kinetic competition between Pol II elongation and
… , we reasoned that sites with Pol II readthrough should still roadblock DNA Pol δ. Indeed, we …
… , we reasoned that sites with Pol II readthrough should still roadblock DNA Pol δ. Indeed, we …
The Mechanism of Transcription Termination by the PJW/PP1 Complex in Trypanosomatids
Y Zhang - 2023 - search.proquest.com
… transcribed polycistronically by RNA polymerase II (RNAPII). Little is known about transcription
termination … RNAPII kinetics There is a kinetic competition between RNAP II and the 5’ to 3…
termination … RNAPII kinetics There is a kinetic competition between RNAP II and the 5’ to 3…
[HTML][HTML] Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance
DJM du Mee, M Ivanov, JP Parker, S Buratowski… - Elife, 2018 - elifesciences.org
… Most DNA in the genomes of higher organisms does not code for proteins. RNA Polymerase
II (Pol II) transcribes non-coding DNA into long non-coding RNAs (lncRNAs), but biological …
II (Pol II) transcribes non-coding DNA into long non-coding RNAs (lncRNAs), but biological …
A crucial RNA-binding lysine residue in the Nab3 RRM domain undergoes SET1 and SET3-responsive methylation
… -K363R is associated with transcription termination defects in vivo and reduced RNA binding
affinity in vitro… Unravelling the means to an end: RNA polymerase II transcription termination …
affinity in vitro… Unravelling the means to an end: RNA polymerase II transcription termination …
Regulation of RNA polymerase II transcription by Spt4 in Saccharomyces cerevisiae
Ü Uzun - 2020 - ora.ox.ac.uk
… termination, transcription of small non-coding RNAs including snRNAs and snoRNAs, are
terminated by the Nrd1, Nab3 and Sen1 dependent … a kinetic race between transcribing …
terminated by the Nrd1, Nab3 and Sen1 dependent … a kinetic race between transcribing …
[图书][B] Stochastic modeling of the torpedo mechanism of eukaryotic transcription termination
RJ Murphy - 2017 - search.proquest.com
… subunit in RNA polymerase II CUT: cryptic unstable transcript … for RNAPII: the Nrd1-Nab3-Sen1
dependent pathway, the … constant, and the kinetic competition between Xrn2 and RNAPII …
dependent pathway, the … constant, and the kinetic competition between Xrn2 and RNAPII …
Organismal benefits of transcription speed control at gene boundaries
… RNA polymerase II (RNAPII) transcription is crucial for gene expression. RNAPII density …
alters kinetic competition between transcriptional stalling, termination, and further elongation. …
alters kinetic competition between transcriptional stalling, termination, and further elongation. …
[HTML][HTML] Cell-size-dependent transcription of FLC and its antisense long non-coding RNA COOLAIR explain cell-to-cell expression variation
… Single-cell quantification of transcription kinetics and variability promotes a mechanistic
understanding of gene regulation. Here, using single-molecule RNA fluorescence in situ …
understanding of gene regulation. Here, using single-molecule RNA fluorescence in situ …
Helicases as transcription termination factors: Different solutions for a common problem
Z Han, O Porrua - Transcription, 2018 - Taylor & Francis
… termination factors described above, RNA polymerase pausing is a strict requirement for
Sen1-dependent termination … for a kinetic competition between termination and RNAPII …
Sen1-dependent termination … for a kinetic competition between termination and RNAPII …
Relationships Between RNA Polymerase II Activity and Spt Elongation Factors to Spt- Phenotype and Growth in Saccharomyces cerevisiae
P Cui, H Jin, MR Vutukuru… - G3: Genes, Genomes …, 2016 - academic.oup.com
… the relationship between RNA Polymerase II (Pol II) activity, functions of Spt elongation
factors, and cryptic transcription because of the previous observation that increased-activity Pol II …
factors, and cryptic transcription because of the previous observation that increased-activity Pol II …