[PDF][PDF] Qualitative and Semi-Quantitative Analysis of Signal Transduction Networks
R Samaga - 2018 - pure.mpg.de
… to cellular signaling networks include the identification of signaling pathways and feedback
loops, and the analysis … different modeling methods that are central to this work (Section 2.4). …
loops, and the analysis … different modeling methods that are central to this work (Section 2.4). …
Qualitative and semi quantitative systems approaches to complex systems modelling–Intuitive and flexible models of biological systems: A thesis submitted in partial …
M Alsharaiah - 2018 - researcharchive.lincoln.ac.nz
… in ways that produce nonlinear and complex systems behaviour such as oscillations. A number
of modelling approaches … components, while discrete models can simulate the biological …
of modelling approaches … components, while discrete models can simulate the biological …
Efficient parameter estimation for ODE models of cellular processes using semi-quantitative data
D Dorešić, S Grein, J Hasenauer - Bioinformatics, 2024 - academic.oup.com
… (ODE) models are used for a broad spectrum of applications, ranging from cellular signaling, …
To evaluate how well the three modeling approaches can recover the true measurement …
To evaluate how well the three modeling approaches can recover the true measurement …
Semi-quantitative modelling of gene regulatory processes with unknown parameter values using fuzzy logic and Petri nets
… a semi-quantitative fuzzy model of each biological process [16], which enables us to model
system… cal interface for both qualitative and quantitative modelling approaches. On one hand, …
system… cal interface for both qualitative and quantitative modelling approaches. On one hand, …
Model calibration and uncertainty analysis in signaling networks
T Heinemann, A Raue - Current opinion in biotechnology, 2016 - Elsevier
… modeling cellular signal transduction networks has been the inference of crucial pathway
components and the qualitative … The spectrum of modeling approaches for signaling networks …
components and the qualitative … The spectrum of modeling approaches for signaling networks …
Logical versus kinetic modeling of biological networks: applications in cancer research
… In this short review, we remind the reader how these two … of semi-quantitative approaches
for modeling large biological … , a number of qualitative modeling methods emerged in the …
for modeling large biological … , a number of qualitative modeling methods emerged in the …
Using both qualitative and quantitative data in parameter identification for systems biology models
… to identify model parameters, but experimentalists are reluctant to acquire time courses,
which are more costly than qualitative or semi-quantitative measurements. Our approach allows …
which are more costly than qualitative or semi-quantitative measurements. Our approach allows …
Modelling signalling networks from perturbation data
… Intracellular signalling is realized by complex signalling … Modular Response Analysis (MRA)
is a convenient modelling method to study signalling networks in various contexts. …
is a convenient modelling method to study signalling networks in various contexts. …
[HTML][HTML] Formal derivation of qualitative dynamical models from biochemical networks
… according to the relative position of some expressions that depend on the initial
concentrations of some proteins and on the rates of the reactions, with respect to some semi-quantitative …
concentrations of some proteins and on the rates of the reactions, with respect to some semi-quantitative …
Signaling Networks. Simulations of Biochemical Interactions. Applications to Molecular Oncology
L Tortolina, N Castagnino, R Montagna… - Functional …, 2019 - taylorfrancis.com
… Qualitative expectations become progressively more untractable for the direct intuition of …
semi-quantitative predictions are impossible. On the other end, the quantitative/semiquantitative …
semi-quantitative predictions are impossible. On the other end, the quantitative/semiquantitative …