Exon-based phylogenomics strengthens the phylogeny of Neotropical cichlids and identifies remaining conflicting clades (Cichliformes: Cichlidae: Cichlinae)

KL Ilves, D Torti, H López-Fernández - Molecular Phylogenetics and …, 2018 - Elsevier
… Recent studies are rapidly turning cichlids into a meaningful … the exceptionally diverse
Neotropical freshwater fish fauna (eg, … In fact, the early radiation of the Neotropical cichlid tribes in …

Tempo and rates of diversification in the South American cichlid genus Apistogramma (Teleostei: Perciformes: Cichlidae)

C Tougard, CR Garcia Davila, U Römer… - PLoS …, 2017 - journals.plos.org
… history of the Neotropical dwarf cichlid genus Apistogramma … This suggests a lack of
phylogenetic resolution rather than fastMultilocus phylogeny of Crenicichla (Teleostei: Cichlidae), …

Neotropical riverine cichlids: adaptive radiation and macroevolution at continental scales

H López-Fernández - The behavior, ecology and evolution of cichlid fishes, 2021 - Springer
… Essentially, increasing diversity during adaptive radiation is evidenced by the rapid
Despite the relatively poor state of our understanding of cichlid ages, using phylogenies for …

Understanding explosive diversification through cichlid fish genomics

W Salzburger - Nature Reviews Genetics, 2018 - nature.com
… of rapidly diversifying clades at the interface between population genetics and phylogenetics
to occur in adaptive radiations 139 — can also lead to phylogenetic incongruence. d | When …

Rapid Parallel Morphological and Mechanical Diversification of South American Pike Cichlids (Crenicichla)

ED Burress, L Piálek, J Casciotta, A Almirón… - Systematic …, 2023 - academic.oup.com
radiation of South American pike cichlids (Crenicichla) using phylogenomics and phylogenetic
… We find that species flocks in the Uruguay and Iguazú River basins rapidly diversified into …

Continental cichlid radiations: functional diversity reveals the role of changing ecological opportunity in the Neotropics

JH Arbour, H López-Fernández - Proceedings of the …, 2016 - royalsocietypublishing.org
… -calibrated multi-locus molecular phylogeny of 154 Neotropical cichlidNeotropical cichlids
(figure 1) was previously found to represent a gradient from elongate-bodied fishes with fast

Phylogenomics of pike cichlids (Cichlidae: Crenicichla): the rapid ecological speciation of an incipient species flock

ED Burress, F Alda, A Duarte, M Loureiro… - Journal of …, 2018 - academic.oup.com
… First, we aim to produce a robust phylogenetic framework for … The algorithm takes multilocus
SNP data to infer quartet trees … radiation of five riverine species of Crenicichla have rapidly

Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes

I Irisarri, P Singh, S Koblmüller… - Nature …, 2018 - nature.com
Cichlid fishes (Cichlidae), with >1700 described species, are … probabilities and multi-locus
bootstrapping proportions, … Ma and between African and Neotropical cichlids at 143.9–98.9 Ma…

[HTML][HTML] … species-level phylogeny and delimitation support significantly underestimated diversity and endemism in the largest Neotropical cichlid genus (Cichlidae …

O Říčan, K Dragová, A Almirón, J Casciotta, J Gottwald… - PeerJ, 2021 - peerj.com
… the largest community of freshwater fishes in the world with … as pools and riffles and even
rapids, but generally few species are … multilocus coalescent-based methods are not applicable). …

[HTML][HTML] Unraveling the systematics and evolution of the 'Geophagus' brasiliensis (Cichliformes: Cichlidae) species complex

LA Argolo, H López-Fernández, H Batalha-Filho… - Molecular Phylogenetics …, 2020 - Elsevier
Multilocus and phylogenomic analyses consistently found Geophagus sensu … of Neotropical
cichlids is known to have happened in early bursts of adaptive radiation in their phylogeny, …