… predictions across the whole genome. Thus, the new NCBI's Prokaryotic Genome Annotation
Pipeline (PGAP) relies more on sequence similarity when confident comparative data are …

… the RefSeq prokaryotic collection: the annotation pipeline itself and the … the quality of gene
annotation and to refresh annotation in a timely … NCBI prokaryotic genome annotation pipeline …

… Furthermore, most of these automated microbial genome annotation pipelines are based on
… -annotation of an additional 50 prokaryotic genomes retrieved in the public NCBI genomes …

… and archaeal genomes, the focus of this article, RefSeq uses a single annotation pipeline,
PGAP (Prokaryotic Genome Annotation … NCBI prokaryotic genome annotation pipeline …

… We developed a prokaryotic genome annotation pipeline, DFAST, that also supports genome
submission to public sequence databases. … NCBI prokaryotic genome annotation pipeline …

… Several additional processes at NCBI are available to improve data during the submission
process including recent improvements in the Prokaryotic Genome Annotation Pipeline (…

… We compared MicrobeAnnotator to other popular genome annotation pipelines, including
… This difference is mostly driven by the inclusion of NCBI’s RefSeq database and UniProt …

… and handling of contaminated genomes, and estimation of … of the Prokaryotic Genome
Annotation Pipeline (PGAP) and … NCBI on any public or privately-owned genome. It produces …

… Genome annotation is a primary step in genomic research. To establish a light and portable
prokaryotic genome annotation pipeline … ” (Prokaryotic Contig Annotation Pipeline Server). …

… prokaryotic and eukaryotic genome annotation pipelines but has no viral annotation pipeline
… GenBank does not currently have an automatic viral genome annotation pipeline. The …