Studies have demonstrated that pervasive gene tree conflict underlies several important
phylogenetic relationships where different species tree methods produce conflicting results.
Here, we present a means of dissecting the phylogenetic signal for alternative resolutions
within a data set in order to resolve recalcitrant relationships and, importantly, identify what
the data set is unable to resolve. These procedures extend upon methods for isolating
conflict and concordance involving specific candidate relationships and can be used to …

Studies have demonstrated that pervasive gene tree conflict underlies several important
phylogenetic relationships where different species tree methods produce conflicting results.
Here, we present a means of dissecting the phylogenetic signal for alternative resolutions
within a dataset in order to resolve recalcitrant relationships and, importantly, identify
relationships the dataset is unable to resolve. These procedures extend upon methods for
isolating conflict and concordance involving specific candidate relationships, and can be …