Phylogenetic analysis and protein structure modelling identifies distinct Ca2+/Cation antiporters and conservation of gene family structure within Arabidopsis and rice …

JK Pittman, KD Hirschi - Rice, 2016 - Springer
… is an ancient and widespread family of ion-coupled cation transporters found in … phylogenetic
relationship. Here we have performed further phylogenetic analysis of rice and Arabidopsis

Phylogenetic and ion-response analyses reveal a relationship between gene expansion and functional divergence in the Ca2+/cation antiporter family in …

Y Zheng, LB Wang, SF Sun, SY Liu, MJ Liu… - Plant Molecular Biology, 2021 - Springer
… Phenotype of Arabidopsis thaliana mutants showed that loss of genes with a greater … This
study indicates a possible evolutionary scheme for cation transport and illustrates distinct fates …

Phylogenetic Diversity and Physiological Roles of Plant Monovalent Cation/H+ Antiporters

SV Isayenkov, SA Dabravolski, T Pan… - Frontiers in plant …, 2020 - frontiersin.org
… of the CPA proteins in Arabidopsis (B). (A) ABD, … phylogenetic relation in plant kingdom
suggests that the existence of seven different clades (Figure 6). In contrast to other CPA families, …

Structure, function, regulation and phylogenetic relationship of ZIP family transporters of plants

TP Ajeesh Krishna, T Maharajan… - Frontiers in Plant …, 2020 - frontiersin.org
… + uptake and transport in Arabidopsis. IRTs of Arabidopsis has the ability to transport several
… structure, mechanism and phylogenetic relationships of plant ZIP transporters. We provided …

Genome-wide identification of ATP binding cassette (ABC) transporter and heavy metal associated (HMA) gene families in flax (Linum usitatissimum L.)

N Khan, FM You, R Datla, S Ravichandran, B Jia… - BMC genomics, 2020 - Springer
… The results of the phylogenetic relationships between the genes were consistent with
previous findings in Arabidopsis thaliana, Brassica rapa, and Brassica napus [7, 35]. Flax had …

Comparative and phylogenetic analysis of zinc transporter genes/proteins in plants

R Vatansever, İİ Özyiğit, E Filiz - Turkish Journal of Biology, 2016 - journals.tubitak.gov.tr
… Based on a homology search, the retrieved sequences were identified as corresponding
homologs of either Arabidopsis thaliana or Oryza sativa. Phylogenetic analysis also supported …

The similar and different evolutionary trends of MATE family occurred between rice and Arabidopsis thaliana

L Wang, X Bei, J Gao, Y Li, Y Yan, Y Hu - BMC plant biology, 2016 - Springer
Phylogenetic relationships and exon-intron structure of MATE genes. a A neighbor-joining
(NJ) phylogenetic tree was constructed using the complete protein sequence alignments of …

More transporters, more substrates: the Arabidopsis major facilitator superfamily revisited

M Niño-González, E Novo-Uzal, DN Richardson… - Molecular plant, 2019 - cell.com
… and versatility of these transporters. Here, we present a phylogenetic analysis of all
annotated MFS domain-containing proteins encoded in the Arabidopsis thaliana genome and …

Functional & Phylogenetic Analysis of Arabidopsis thaliana Organic Cation Transporters (OCT5 & OCT1) Genes in Polyamine Transport in Plants

KO Chiteri - 2019 - rave.ohiolink.edu
… and within organelles, this study focused on the OCT family in the model plant Arabidopsis
… Specific goals are:• To perform sequence alignments, construct phylogenetic relations, and …

Comprehensive in silico characterization and expression profiling of nine gene families associated with calcium transport in soybean

H Zeng, B Zhao, H Wu, Y Zhu, H Chen - Agronomy, 2020 - mdpi.com
… These domains include the N-terminal autoinhibitory domain, N-terminus cation transporter/…
no Arabidopsis GLR was found (Figure 6). Therefore, the phylogenetic relationships among …