Systematic proteomic analysis of protein methylation in prokaryotes and eukaryotes revealed distinct substrate specificity

M Zhang, JY Xu, H Hu, BC Ye, M Tan - Proteomics, 2018 - Wiley Online Library
… Therefore, we searched the methylation on the amino acid residues known as substrates
as well as the possible ones. Using Mascot ion score >35 and peptide length between 7 and …

DNA methylases

RLP Adams, RH Burdon - Enzymes of nucleic acid synthesis and …, 2018 - taylorfrancis.com
… compare specific activities. However, the specific activities of the mammalian DNA methylase
… an intrinsic property of eukaryotic DNA methylases, whether the substrate DNA used is not …

Target specificity of mammalian DNA methylation and demethylation machinery

M Ravichandran, RZ Jurkowska… - Organic & biomolecular …, 2018 - pubs.rsc.org
… methionine (AdoMet) and the DNA substrate, and for catalysis. C… prokaryotic and eukaryotic
C5 DNA methyltransferases and … along the substrate and catalysis of successive methylation

Isospecific adenine DNA methyltransferases show distinct preferences towards DNA substrates

E Wons, I Mruk, T Kaczorowski - Scientific Reports, 2018 - nature.com
… if these enzymes of the same DNA substrate specificity somehow differ in mechanisms of …
Similar observation was made in the case of eukaryotic DNMT1 39 , where ssDNA substrate

Characterization of eukaryotic DNA N6-methyladenine by a highly sensitive restriction enzyme-assisted sequencing

GZ Luo, F Wang, X Weng, K Chen, Z Hao, M Yu… - Nature …, 2016 - nature.com
… To explore the sensitivity of DpnI to different methylation status, we synthesized single-stranded
DNA probes with or without 6mA at specific sequence motifs, and annealed them to …

Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA

F Rodriguez, IA Yushenova, D DiCorpo… - Nature …, 2022 - nature.com
… activity on preferred substrates in vitro revealed … DNA methylation marks with specific histone
modifications, we performed chromatin immunoprecipitation followed by deep sequencing (…

[HTML][HTML] Multi-substrate specificity and the evolutionary basis for interdependence in tRNA editing and methylation enzymes

S Dixit, JC Henderson, JD Alfonzo - Frontiers in genetics, 2019 - frontiersin.org
… evolved to increase tRNA substrate specificity and prevent rampant non-specific methylation.
Eukaryotic two-subunit dependent methyltransferases. The figure shows examples of …

Current research on eukaryotic DNA methyltransferases

JN Lapeyre, M Ruchirawat… - Progress in Nonhistone …, 2018 - taylorfrancis.com
… such protein-DNA interactions as specific lac repressor binding … for eukaryotic cells to
modulate specific protein-DNA in… if DNA methylation is an ordered bi-substrate reaction in …

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

LM Iyer, D Zhang, L Aravind - Bioessays, 2016 - Wiley Online Library
… Thus, m 6 A marks in eukaryotic DNA and RNA might be … by RM systems is methylation of
specific bases in DNA, recent … oxidation capacity in vitro on DNA substrates 54. However, all …

DNA adenine methylation in eukaryotes: Enzymatic mark or a form of DNA damage?

M Bochtler, H Fernandes - Bioessays, 2021 - Wiley Online Library
methyltransferase, activity is highest when the substrate … [ 20 ] However, specific enzymes
with a role in the reversal of … polymerases and some eukaryotic DNA polymerases. [ 108, 109 ] …