Identification and validation of reference genes for qRT-PCR analyses under different experimental conditions in Allium wallichii

Y Lin, G Liu, Y Rao, B Wang, R Tian, Y Tan… - Journal of Plant …, 2023 - Elsevier
… first set of suitable reference genes for qRT-PCR analyses, … one reference gene as internal
controls. The primers used for … genes that can be employed for qRT-PCR normalization. …

Comprehensive analysis of NAC transcription factors uncovers their roles during fiber development and stress response in cotton

H Sun, M Hu, J Li, L Chen, M Li, S Zhang, X Zhang… - BMC plant biology, 2018 - Springer
… selected GhNAC genes in fiber development by qRT-PCR. … was used as the internal control
to calculate and normalize the … create new cotton varieties possessing good agronomic traits …

Selection and validation of reference genes for qRT-PCR analysis during biological invasions: The thermal adaptability of Bemisia tabaci MED

TM Dai, ZC Lü, WX Liu, FH Wan - PloS one, 2017 - journals.plos.org
… most suitable candidate reference genes for normalisation of … , the tubes were covered with
cotton along 1/4 tube length … EF1-α was the best optimal internal control genes in almost all of …

Insight into the relationship between S-lignin and fiber quality based on multiple research methods

S Zhang, T Jia, Z Zhang, X Zou, S Fan, K Lei… - Plant Physiology and …, 2020 - Elsevier
… transcriptome data was verified by qRT-PCR assay. Total 62 … quality during cotton fiber
development, we speculate that the ratio … ) gene was used as an internal control to normalize the …

Identification of key proteins related to high-quality fiber in Upland cotton via proteomics analysis

J Jiang, Z Shi, F Ma, K Liu - Plant Cell Reports, 2022 - Springer
… The relative transcript level was determined and normalizedbest, followed by Sea island
cotton Pima 3–79 and Upland … in developing fibers of SY6167 and TM-1 using qRT-PCR. A …

Genome-Wide Identification and Characterization of GhCOMT Gene Family during Fiber Development and Verticillium Wilt Resistance in Cotton

C Wu, D Zuo, S Xiao, Q Wang, H Cheng, L Lv, Y Zhang… - Plants, 2021 - mdpi.com
… The data were normalized, and FPKM (Fragments per … From the results of qRT-PCR, we
can observe that the expression … GhUBQ7 (DQ116441) was used as the internal control. Each …

Identification of Loci and Candidate Genes Responsible for Fiber Length in Upland Cotton (Gossypium hirsutum L.) via Association Mapping and Linkage Analyses

C Zhang, L Li, Q Liu, L Gu, J Huang, H Wei… - Frontiers in plant …, 2019 - frontiersin.org
… during the fiber development stage, and the qRT-PCR analysis … as an internal reference gene
to normalize the cDNA … in cotton is a highly polygenic trait and is suitable for QTL analyses. …

Exploring the regulatory role of non-coding RNAs in fiber development and direct regulation of GhKCR2 in the fatty acid metabolic pathway in upland cotton

J Wang, X Wang, L Wang, MF Nazir, G Fu… - International Journal of …, 2024 - Elsevier
… to 0.9, we finally obtain an appropriate soft-threshold value of 14, … levels determined by
qRT-PCR were normalized to the … effectors, reporter and internal control vectors used in transient …

Overexpression of cotton Trihelix transcription factor GhGT-3b_A04 enhances resistance to Verticillium dahliae and affects plant growth in Arabidopsis thaliana

H Mao, W Zhang, J Lv, J Yang, S Yang, B Jia… - Journal of Plant …, 2023 - Elsevier
gene AtACTIN in Arabidopsis was used as an internal control… mapped (FPKM) normalized
log10 (transformed counts). The … We then performed qRT-PCR of some genes in the …

A cotton miRNA is involved in regulation of plant response to salt stress

S Gao, L Yang, HQ Zeng, ZS Zhou, ZM Yang, H Li… - Scientific reports, 2016 - nature.com
Cotton actin2, an internal control for constitutive expression, … of its target gene was performed
also using qRT-PCR. The … The unique reads were normalized to give reads per million and …