Replication Study: Systematic identification of genomic markers of drug sensitivity in cancer cells

JP Vanden Heuvel, E Maddox, SW Maalouf - Elife, 2018 - elifesciences.org
… We found Ewing’s sarcoma cell lines, overall, were more sensitive to the PARP inhibitor
olaparib than osteosarcoma cell lines; however, while the effect was in the same direction as the …

Mutational signatures are markers of drug sensitivity of cancer cells

J Levatić, M Salvadores, F Fuster-Tormo… - Nature …, 2022 - nature.com
… Because cancer therapeutics often target DNA synthesis or repair, we asked if mutational …
make useful markers of drug sensitivity. We detect mutational signatures in cancer cell line …

Registered report: Systematic identification of genomic markers of drug sensitivity in cancer cells

…, J Bullenkamp, Reproducibility Project: Cancer Biology - Elife, 2016 - elifesciences.org
… from “Systematic identification of genomic markers of drug sensitivity in cancer cells” by …
effect of 130 drugs on 639 cancer-derived cell lines in order to identify novel interactions for …

[HTML][HTML] Registered report: Systematic identification of genomic markers of drug sensitivity in cancer cells

JPV Heuvel, J Bullenkamp, R Project - Elife, 2016 - ncbi.nlm.nih.gov
… from “Systematic identification of genomic markers of drug sensitivity in cancer cells” by …
effect of 130 drugs on 639 cancer-derived cell lines in order to identify novel interactions for …

Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity

J Wang, D Mouradov, X Wang, RN Jorissen… - Gastroenterology, 2017 - Elsevier
… to systematically evaluate cell lines as tumor models. We further integrated cell line
proteogenomic data with drug sensitivity … and to connect tumor proteomic subtypes to drug

A systematic study on drug-response associated genes using baseline gene expressions of the Cancer Cell Line Encyclopedia

X Liu, J Yang, Y Zhang, Y Fang, F Wang, J Wang… - Scientific reports, 2016 - nature.com
… enormous opportunities to systematically identify DRA biomarkers. For … identify gene
expressions, co-expressions, and co-expression modules differentially changed with drug sensitivity

Drug-sensitivity screening and genomic characterization of 45 HPV-negative head and neck carcinoma cell lines for novel biomarkers of drug efficacy

T Lepikhova, PR Karhemo, R Louhimo, B Yadav… - Molecular cancer …, 2018 - AACR
… The connection between high FAM83H expression and responsiveness to the EGFR
inhibitor erlotinib was validated by gene silencing and from the data set at the Cancer Cell Line …

Systematic identification of non-coding pharmacogenomic landscape in cancer

Y Wang, Z Wang, J Xu, J Li, S Li, M Zhang… - Nature …, 2018 - nature.com
… that cancer cellcancer cells and A549 lung cancer cells. In accordance with our LENP
prediction, overexpression of EPIC1 led to the drug resistance of iBET in MCF-7 and A549 cells (…

Multiplex gene quantification as digital markers for extremely rapid evaluation of chemo-drug sensitivity

J Fan, Y Feng, Y Cheng, Z Wang, H Zhao, EA Galan… - Patterns, 2021 - cell.com
cancer cell lines and patient tumors due to their difference in … the prediction of drug sensitivity
using cell lines and patient tumor-… marker-based prediction of drug sensitivity on cancer cell

Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer

S Kangaspeska, S Hultsch, A Jaiswal, H Edgren… - BMC cancer, 2016 - Springer
… Development of primary drug resistance can make the cancer cells … Using these resistant
cell line models and their isogenic … systematic high throughput drug sensitivity and resistance