Emergence of dynamic properties in network hypermotifs
M Adler, R Medzhitov - … of the National Academy of Sciences, 2022 - National Acad Sciences
… To explore whether network motifs are joined in real networks in … different logic gates and
flip-flops, the three-node feedback loop … This mathematical model therefore provides a possible …
flip-flops, the three-node feedback loop … This mathematical model therefore provides a possible …
A robust molecular network motif for period-doubling devices
C Cuba Samaniego, E Franco - ACS synthetic biology, 2018 - ACS Publications
… gene networks and one on nucleic acid strand displacement … Our mathematical and
computational analysis suggests that … These interactions can be realized using an AND logic gate …
computational analysis suggests that … These interactions can be realized using an AND logic gate …
From chemical soup to computing circuit: transforming a contiguous chemical medium into a logic gate network by modulating its external conditions
… implementing logic gates in a well-stirred chemical system that involves modifying the chemistry’s
… , more scalable route for creating chemistry-based logic gate networks and computers. …
… , more scalable route for creating chemistry-based logic gate networks and computers. …
Infochemistry and the future of chemical information processing
NV Ryzhkov, KG Nikolaev, AS Ivanov… - … Review of Chemical …, 2021 - annualreviews.org
… Chemical logic gates by definition operate via Boolean logic (… Along with chemical logic
systems, biological logic networks … Tools based on Boolean logic, mathematical statistics, and …
systems, biological logic networks … Tools based on Boolean logic, mathematical statistics, and …
DNA-based dynamic reaction networks
… networks (RNs) are attractive for their high programmability, as well as cascading and fan-out
ability, which are similar to the basic principles of electronic logic gates. … complex chemical …
ability, which are similar to the basic principles of electronic logic gates. … complex chemical …
Conclusions and Perspectives: Further Research Directions and Possible Applications
E Katz - DNA-and RNA-Based Computing Systems, 2020 - books.google.com
… stochastic chemical reaction networks (SCRNs) model 31 Turing machines 33 DNA keypad
locks 236–238 DNA logic circuits actuators 125 arithmetic full-adder, full-subtractor 234 half-…
locks 236–238 DNA logic circuits actuators 125 arithmetic full-adder, full-subtractor 234 half-…
[图书][B] An introduction to systems biology: design principles of biological circuits
U Alon - 2019 - api.taylorfrancis.com
… This book presents one path into systems biology based on mathematical principles, with …
networks are made of repeating occurrences of simple patterns called network motifs. Each …
networks are made of repeating occurrences of simple patterns called network motifs. Each …
Distributed biological computation: from oscillators, logic gates and switches to a multicellular processor and neural computing applications
… , namely modules, systems, and networks. Modules present … form ring-like patterns based
on chemical gradients of an acyl-… biological systems is guided by mathematical models in the …
on chemical gradients of an acyl-… biological systems is guided by mathematical models in the …
Propelling DNA computing with materials' power: Recent advancements in innovative DNA logic computing systems and smart bio‐applications
… logic devices can be classified into common logic gates, advanced logic devices for specific
arithmetic … networks could realize high-level modulation of biomolecular information on cell …
arithmetic … networks could realize high-level modulation of biomolecular information on cell …
Self-organizing materials built with DNA
FC Simmel, R Schulman - MRS Bulletin, 2017 - cambridge.org
… d’Arcy Wentworth Thompson applied mathematical and physical … synthetic-reaction networks
as chemical-control systems. Such … , logic gates,30,31 molecular classifiers,32 chemical con…
as chemical-control systems. Such … , logic gates,30,31 molecular classifiers,32 chemical con…