Recent advances on polyproline II

TJ Narwani, H Santuz, N Shinada… - Amino Acids, 2017 - Springer
structure of an oligoproline adopting an all-trans polyproline … This unique property is a reason
for PPII conformation to … The compactness and inherent flexibility of the PPII conformation is …

Structural and functional analyses of PolyProline-II helices in globular proteins

P Kumar, M Bansal - Journal of Structural Biology, 2016 - Elsevier
structure consists of 6 PPII-helices that are stacked in two sets of three and form a compact
brick-like structure… α-helices have unique preference for amino acids at various positions, …

Omnipresence of the polyproline II helix in fibrous and globular proteins

NG Esipova, VG Tumanyan - Current Opinion in Structural Biology, 2017 - Elsevier
… ) is the third type of the protein backbone structure. This conformation universally exists in
fibrous, globular proteins, and biologically active peptides. It has unique physical and chemical …

Evidence of the reduced abundance of proline cis conformation in protein poly proline tracts

A Urbanek, M Popovic, CA Elena-Real… - Journal of the …, 2020 - ACS Publications
… Proline is unique among the 20 genetically coded amino acids. (1) The … structures known
as poly proline helices of type-I (all-cis right handed, PP-I) or type-II (all-trans left handed, PP-II), …

Effect of residue insertion on the stability of polyproline‐I and II structures: Circular dichroism spectroscopic analyses of block‐type oligo‐prolines (Pro) m‐Gly/Ala‐(Pro …

S Kakinoki, M Kitamura, Y Noguchi, Y Arichi - Peptide Science, 2020 - Wiley Online Library
unique conformational behaviors. First, it is known that oligo- and poly-(l-proline) form two
unique helices, named polyproline… charge-dipole interaction in the compact structure of PP-I. …

[HTML][HTML] Glycine in water favors the polyproline II state

B Andrews, S Zhang, R Schweitzer-Stenner, B Urbanc - Biomolecules, 2020 - mdpi.com
… non-local interactions within compact or globular conformations or … state rather than the
secondary structure of the entire or a … ensembles of glycine residues are rare. Graf et al. explored …

[PDF][PDF] Recent advances on PolyProline II

JC Gelly, AG de Brevern - academia.edu
structure of an oligoproline adopting an all-trans polyproline … This unique property is a reason
for PPII conformation to … The compactness and inherent flexibility of the PPII conformation is …

Copper (II)-binding induces a unique polyproline type II helical structure within the ion-binding segment in the intrinsically disordered F-domain of ecdysteroid receptor …

M Rowińska-Żyrek, A Wiȩch, J Wa̧tły… - Inorganic …, 2019 - ACS Publications
structural and thermodynamic properties of Zn 2+ - and Cu 2+ -complexes with the AaFEcR
domain, based on peptide models of its twostructure, but result in protein compaction. (6) …

The proline/glycine-rich region of the biofilm adhesion protein Aap forms an extended stalk that resists compaction

AE Yarawsky, LR English, ST Whitten… - Journal of molecular …, 2017 - Elsevier
… polypeptide with unusually high polyproline type II helix propensity… with an unusually high
propensity for PPII structure. … Another unusual feature of PGR was that both AUC and DLS data …

Deciphering the Backbone Noncovalent Interactions that Stabilize Polyproline II Conformation and Reduce cis Proline Abundance in Polyproline Tracts

B Sahariah, BK Sarma - The Journal of Physical Chemistry B, 2021 - ACS Publications
… such as trifluoroethanol but prefers a more compact right-handed PPI helical geometry in
less-… were unique PPII helical chains of different lengths (Figure 5A). The structural parameters …