[HTML][HTML] Profiling cell signaling networks at single-cell resolution
XK Lun, B Bodenmiller - Molecular & Cellular Proteomics, 2020 - ASBMB
… -cell signaling network profiling … network characterization using single-cell data and
discuss potential confounding factors that need to be considered in single-cell signaling network …
discuss potential confounding factors that need to be considered in single-cell signaling network …
eXpression2Kinases (X2K) Web: linking expression signatures to upstream cell signaling networks
… the activity of cell signaling pathways is currently much more difficult. eXpression2Kinases
(X2K) computationally predicts involvement of upstream cell signaling pathways, given a …
(X2K) computationally predicts involvement of upstream cell signaling pathways, given a …
The cancer stem-cell signaling network and resistance to therapy
A Carnero, Y Garcia-Mayea, C Mir, J Lorente… - Cancer treatment …, 2016 - Elsevier
… is the “cancer stem-cell (SC) model” … cells, the cancer-initiating cells (CICs) or cancer stem
cells (CSCs), as they will be referred to in this article [1]. This model implies a hierarchy of cells …
cells (CSCs), as they will be referred to in this article [1]. This model implies a hierarchy of cells …
Cell signaling as a cognitive process
A Koseska, PIH Bastiaens - The EMBO journal, 2017 - embopress.org
… the dynamics of signaling networks and how this information can be extracted experimentally.
We start by considering undirected protein interaction networks derived from proteomic …
We start by considering undirected protein interaction networks derived from proteomic …
Unraveling cell-to-cell signaling networks with chemical biology
ZJ Gartner, JA Prescher, LD Lavis - Nature Chemical Biology, 2017 - nature.com
… networks of interacting cells. Given their centrality in cellular decision-making, cell-to-cell
signaling networks play … For example, cell-to-cell signaling is known to coordinate responses to …
signaling networks play … For example, cell-to-cell signaling is known to coordinate responses to …
[HTML][HTML] Computation and visualization of cell–cell signaling topologies in single-cell systems data using Connectome
… For demonstration, we explore the network topology of cell–cell signaling based on
Vascular Endothelial Growth Factor A (Vegfa) over time. Figure 4B–D suggests that there is a …
Vascular Endothelial Growth Factor A (Vegfa) over time. Figure 4B–D suggests that there is a …
Methods for the analysis of protein phosphorylation–mediated cellular signaling networks
FM White, A Wolf-Yadlin - Annual Review of Analytical Chemistry, 2016 - annualreviews.org
… a comprehensive understanding of signaling network function are daunting. The … cellular
signaling network need to be identified and their temporal response to different levels of cellular …
signaling network need to be identified and their temporal response to different levels of cellular …
How the T cell signaling network processes information to discriminate between self and agonist ligands
… problem as one where the T cell signaling network must discriminate between two inputs:
infected APCs that present a small number of agonist ligands (a bona fide signal) in a sea of …
infected APCs that present a small number of agonist ligands (a bona fide signal) in a sea of …
[HTML][HTML] Conceptual evolution of cell signaling
A Nair, P Chauhan, B Saha, KF Kubatzky - International journal of …, 2019 - mdpi.com
… Cells … signaling networks that relay extracellular cues into the cell, culminating in the
reprogramming of various biochemical, genetic, and structural processes. The cellular signaling …
reprogramming of various biochemical, genetic, and structural processes. The cellular signaling …
The cornerstone K-RAS mutation in pancreatic adenocarcinoma: From cell signaling network, target genes, biological processes to therapeutic targeting
N Jonckheere, R Vasseur, I Van Seuningen - Critical reviews in oncology …, 2017 - Elsevier
… K-RAS is central in cellular signaling network of pancreatic cancer cells. … As K-RAS mutations
control a wide array of cell signaling pathways (Fig. 2), it was expected that these mutations …
control a wide array of cell signaling pathways (Fig. 2), it was expected that these mutations …