DNA methylation-based variation between human populations

F Kader, M Ghai - Molecular genetics and genomics, 2017 - Springer
… Not only has DNA methylation differences shown to impact … Differential DNA hypermethylation
in promoters occurred … women; hypermethylated differentially methylated CpGs in African …

Substantial DNA methylation differences between two major neuronal subtypes in human brain

A Kozlenkov, M Wang, P Roussos… - Nucleic acids …, 2016 - academic.oup.com
… Next, we identified CpH sites that were differentially methylated between the GABA and
GLU neurons, using a threshold of [|delta (β)| > 0.1] and FDR-corrected P-value < 0.05. In …

Detecting differential DNA methylation from sequencing of bisulfite converted DNA of diverse species

I Huh, X Wu, T Park, SV Yi - Briefings in bioinformatics, 2019 - academic.oup.com
DNA methylation, one of the foremost goals in DNA methylation studies is to detect differentially
methylated … demonstrate below, are fundamentally different from the increasingly popular …

Association of DNA methylation differences with schizophrenia in an epigenome-wide association study

C Montano, MA Taub, A Jaffe, E Briem… - JAMA …, 2016 - jamanetwork.com
… of the DNA methylation differences at the top-ranked 150 differentially methylated positions
… B, DNA methylation for an individual CpG in the intron of NCOR2, in the discovery (top) and …

[HTML][HTML] Genome-wide DNA methylation profiling identifies differential methylation in uninvolved psoriatic epidermis

D Verma, AK Ekman, CB Eding, C Enerbäck - Journal of Investigative …, 2018 - Elsevier
… However, an in-depth comparison of methylation differencesdifferentially methylated sites
(DMS), thereby clearly distinguishing the skin phenotypes. Substantial methylation differences

[HTML][HTML] Profiling genome-wide DNA methylation

WS Yong, FM Hsu, PY Chen - Epigenetics & chromatin, 2016 - Springer
methylation assays, along with comparisons and biological examples, to provide an overview
of DNA methylation … employed to identify differentially methylated loci in comparisons. For …

MethylAction: detecting differentially methylated regions that distinguish biological subtypes

JM Bhasin, B Hu, AH Ting - Nucleic acids research, 2016 - academic.oup.com
differential DNA methylation among disease subtypes, particularly in the case of cancer. DNA
methylation differences … and more work remains to define differences across inter- and intra…

Methods for analysis of specific DNA methylation status

MJ Pajares, C Palanca-Ballester, R Urtasun… - Methods, 2021 - Elsevier
DNA methylation. There are three main groups of techniques that allow the identification of
specific regions that are differentially methylated: … , DNA methylation differences identified in …

Overlap between differentially methylated DNA regions in blood B lymphocytes and genetic at-risk loci in primary Sjögren's syndrome

C Miceli-Richard, SF Wang-Renault… - Annals of the …, 2016 - ard.bmj.com
… Our results show that the situation is different in pSS with more DNA methylation alterations
present in B lymphocytes compared with T cells. These findings are in concordance with …

[HTML][HTML] DNA methylation profiling of human prefrontal cortex neurons in heroin users shows significant difference between genomic contexts of hyper-and …

A Kozlenkov, AE Jaffe, A Timashpolsky, P Apontes… - Genes, 2017 - mdpi.com
… to identify differences in DNAm, adjusting for age, sex and tissue pH as covariates. After
correcting for multiple comparisons, we did not identify any differentially methylated (DM) CpGs …