The pattern of DNA methylation alteration, and its association with the expression changes of non-coding RNAs and mRNAs in Moso bamboo under abiotic stress
Y Ding, LH Zou, J Wu, M Ramakrishnan, Y Gao, L Zhao… - Plant Science, 2022 - Elsevier
… explored, particularly in the area of plant hormone signaling. … stress-induced DNA methylation
alteration and non-coding RNAs … ) was used to generate DNA methylome profiles of Moso …
alteration and non-coding RNAs … ) was used to generate DNA methylome profiles of Moso …
Continuous salt stress-induced long non-coding RNAs and DNA methylation patterns in soybean roots
R Chen, M Li, H Zhang, L Duan, X Sun, Q Jiang… - BMC genomics, 2019 - Springer
… Meanwhile, the absence of conserved lncRNA candidates among plant species reflected …
be distinct from other regulatory non-coding RNAs, such as miRNAs. DNA methylation levels of …
be distinct from other regulatory non-coding RNAs, such as miRNAs. DNA methylation levels of …
Replication of a pathogenic non-coding RNA increases DNA methylation in plants associated with a bromodomain-containing viroid-binding protein
DQ Lv, SW Liu, JH Zhao, BJ Zhou, SP Wang… - Scientific Reports, 2016 - nature.com
… Viroids are plant-pathogenic molecules made up of single-stranded circular non-coding
RNAs… tuber viroid (PSTVd) on interference with plant RNA silencing. Using transient induction of …
RNAs… tuber viroid (PSTVd) on interference with plant RNA silencing. Using transient induction of …
Regulation of non-coding RNAs in heat stress responses of plants
J Zhao, Q He, G Chen, L Wang, B Jin - Frontiers in Plant Science, 2016 - frontiersin.org
… We also note that DNA methylation and alternative splicing could affect miRNA expression
under heat stress, and some lncRNAs could respond to heat stress. Finally, we briefly discuss …
under heat stress, and some lncRNAs could respond to heat stress. Finally, we briefly discuss …
Stable methylation of a non-coding RNA gene regulates gene expression in response to abiotic stress in Populus simonii
Y Song, D Ci, M Tian, D Zhang - Journal of experimental botany, 2016 - academic.oup.com
… in regulating gene expression, we hypothesized that DNA methylation changes would
occur in plants exposed to different abiotic stresses and play important roles in stress-responsive …
occur in plants exposed to different abiotic stresses and play important roles in stress-responsive …
[HTML][HTML] Classification and experimental identification of plant long non-coding RNAs
… Plants have evolved two additional non-redundant polymerases (Pol IV and V) that … by RNA
mediated DNA methylation (RdDM) [38]. The plant specific multi-subunit RNA Polymerase IV …
mediated DNA methylation (RdDM) [38]. The plant specific multi-subunit RNA Polymerase IV …
Functions of plants long non-coding RNAs
… in Nongken 58S is caused by the increased DNA methylation in LDMAR promoter region
through the so-called RNA-directed DNA methylation (RdDM) pathway (for more details about …
through the so-called RNA-directed DNA methylation (RdDM) pathway (for more details about …
… of Argonaute 4-Associated Long Non-Coding RNA in Arabidopsis thaliana Sheds Novel Insights into Gene Regulation through RNA-Directed DNA Methylation
PCK Au, ES Dennis, MB Wang - Genes, 2017 - mdpi.com
… , undeniable that the complexity of RdDM is beyond what we have presented here and more
effort is required to understand RNA-induced DNA methylation and its function(s) in plants. …
effort is required to understand RNA-induced DNA methylation and its function(s) in plants. …
DNA and coding/non‐coding RNA methylation analysis provide insights into tomato fruit ripening
S Guo, Y Zheng, D Meng, X Zhao, Z Sang… - The Plant …, 2022 - Wiley Online Library
… Targets of long non-coding RNAs and circular RNAs with different m5C sites were also …
ethylene emission is affected by DNA methylation (5mC), we examined the changes in DNA …
ethylene emission is affected by DNA methylation (5mC), we examined the changes in DNA …
Epiallelic variation of non-coding RNA genes and their phenotypic consequences
J Liu, X Zhong - Nature Communications, 2024 - nature.com
… epialleles of non-coding RNA (ncRNA) genes largely understudied. Here, we uncover
abundant DNA methylation variations of ncRNA genes and their significant correlations with plant …
abundant DNA methylation variations of ncRNA genes and their significant correlations with plant …