Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences

S Moran, C Arribas, M Esteller - Epigenomics, 2016 - Future Medicine
… of the cancer genome, as has been recently shown by the existence of DNA hypomethylation
blocks. Our understanding of the DNA methylation patterns in human cancer has clinical …

Genome-wide quantification of the effects of DNA methylation on human gene regulation

AJ Lea, CM Vockley, RA Johnston, CA Del Carpio… - elife, 2018 - elifesciences.org
… the human genome in the K562 immortalized human cell line. … involved in DNA
methylation-mediated gene regulation and … inter-individual variation in DNA methylation is more …

Links between DNA methylation and nucleosome occupancy in the human genome

CK Collings, JN Anderson - Epigenetics & chromatin, 2017 - Springer
… Similar to bulk genomic DNA, we find a similar cooperative relationship between DNA
methylation levels and CpG frequency in nucleosomal DNA (Fig. 3b). This cooperative mode of …

DNA methylation and DNA methyltransferases

JR Edwards, O Yarychkivska, M Boulard… - Epigenetics & …, 2017 - Springer
… Distribution of DNA methylation across sequence compartments in the human genome.
Vertical axis indicates percentage of total CpG dinucleotides in each indicated compartment; …

[HTML][HTML] DNA methylation in human diseases

Z Jin, Y Liu - Genes & diseases, 2018 - Elsevier
… to genomic imprinting and cancer, the important role of DNA methylation in common human
… recent findings on DNA methylation in these common human diseases using autoimmune …

iMETHYL: an integrative database of human DNA methylation, gene expression, and genomic variation

S Komaki, Y Shiwa, R Furukawa, T Hachiya… - Human genome …, 2018 - nature.com
DNA methylation (DNAm) has a critical role in regulating gene expression. Recent …
interested in the interactive analysis of DNA methylation, gene expression, and genomic variation. …

Mapping of variable DNA methylation across multiple cell types defines a dynamic regulatory landscape of the human genome

J Gu, M Stevens, X Xing, D Li, B Zhang… - … : Genes, Genomes …, 2016 - academic.oup.com
methylated regions of the human DNA methylome. We combined a large collection of
genome-wide DNA methylation … methods, Methylation Dependent ImmunoPrecipitation followed …

[HTML][HTML] Whole genome DNA methylation: beyond genes silencing

R Tirado-Magallanes, K Rebbani, R Lim, S Pradhan… - Oncotarget, 2017 - ncbi.nlm.nih.gov
… Many of the splicing events in the human genome occur co-transcriptionally while the
precursor mRNA remains associated with the chromatin until the introns are excised [61, 62]. This …

A DNA methylation atlas of normal human cell types

N Loyfer, J Magenheim, A Peretz, G Cann, J Bredno… - Nature, 2023 - nature.com
… sites, representing just 3% of around 30 million CpG sites in the human genome 10 . In …
of DNA methylation occurring in blocks, the critical functional units of DNA methylation 11,12 . …

DNA methylation-based variation between human populations

F Kader, M Ghai - Molecular genetics and genomics, 2017 - Springer
… in the human genome. The role of DNA methylation in differential regulation of gene
expression, imprinting (differential gene expression depending on the parent-of-origin) and …