Complete mitogenome assembly of Selenicereus monacanthus revealed its molecular features, genome evolution, and phylogenetic implications

G Lu, W Wang, J Mao, Q Li, Y Que - BMC Plant Biology, 2023 - Springer
… This study assembled the complete mitogenome of the red skin and flesh of pitaya (…
Seventy-eight homologous fragments of the chloroplast genome were identified in the mitogenome, …

[HTML][HTML] Contribution to the mitogenome diversity in Delphacinae: Phylogenetic and ecological implications

YX Huang, FJ Ren, CR Bartlett, YS Wei, DZ Qin - Genomics, 2020 - Elsevier
mitogenomic data to investigate the phylogenetic relationships in Lepidoptera [32,57]. The
support values on phylogenetic tree … delphacine phylogenetic studies based on mitogenomes. …

The complete mitochondrial genome of Lerema accius and its phylogenetic implications

Q Cong, NV Grishin - PeerJ, 2016 - peerj.com
… Here we describe a protocol to assemble mitogenomes from Next Generation
Sequencing reads obtained through whole-genome sequencing and report the 15,338 bp …

Structural and phylogenetic implications of the complete mitochondrial genome of Ledra auditura

JJ Wang, DF Li, H Li, MF Yang, RH Dai - Scientific Reports, 2019 - nature.com
… The assembled mitogenome was initially annotated using the MITOS web server with
invertebrate genetic codes 39 and then analyzed using Geneious R9 27 and NCBI BLAST (https://…

Reconstruction of mitogenomes by NGS and phylogenetic implications for leaf beetles

N Song, X Yin, X Zhao, J Chen, J Yin - Mitochondrial DNA Part A, 2018 - Taylor & Francis
… All these bait sequences can match to the long mitogenomic assemblies with certainty. For
the resulting assemblies from IDBA-UD assembler, 32 out of 39 queries had a similarity more …

Comparative mitogenome analyses uncover mitogenome features and phylogenetic implications of the subfamily Cobitinae

P Yu, L Zhou, WT Yang, L Miao, Z Li, XJ Zhang… - BMC genomics, 2021 - Springer
… , we assembled a large sequence matrix (11,442 bp) of 58 Cobitinae mitogenomes and two
… This study represents the first comparative mitogenome and phylogenetic analyses within …

The first complete mitochondrial genome from the family Hygrophoraceae (Hygrophorus russula) by next-generation sequencing and phylogenetic implications

Q Li, Q Wang, X Jin, Z Chen, C Xiong, P Li… - International journal of …, 2019 - Elsevier
… of reference sequences that can be used in genome assembly has limited the study of the
mitogenomes of fungal species, particularly those belonging to Basidiomycota. To date, <100 …

Comparative analysis of eight mitogenomes of bark beetles and their phylogenetic implications

H Du, J Fang, X Shi, S Zhang, F Liu, C Yu, Z Zhang… - Insects, 2021 - mdpi.com
… The sequences of the control region of mitogenome were not assembled because their
distribution and length are uncertain. Most of the sequences in the control region are located …

Comparative mitochondrial genome analysis of Varunidae and its phylogenetic implications

Y Zhang, L Gong, X Lu, Z Miao, L Jiang, B Liu… - Acta Oceanologica …, 2022 - Springer
… new mitogenome of this genus (Varuna litterata) and added the published mitogenomes to
reconstruct the phylogeny … To assess the single-base accuracy of the assembled genome, we …

Nine mitochondrial genomes of the pyraloidea and their phylogenetic implications (Lepidoptera)

X Liu, M Qi, H Xu, Z Wu, L Hu, M Yang, H Li - Insects, 2021 - mdpi.com
… Here, we sequenced and annotated nine complete mitogenomes for Pyraloidea, and …
phylogenetic analyses, to improve our understanding of mitogenomic evolution and phylogeny of …