Genetic algorithm with a crossover elitist preservation mechanism for protein–ligand docking
B Guan, C Zhang, J Ning - Amb Express, 2017 - Springer
Protein–ligand docking plays an important role in computer-aided pharmaceutical
development. Protein–ligand docking can be defined as a search algorithm with a scoring …
development. Protein–ligand docking can be defined as a search algorithm with a scoring …
HIGA: a running history information guided genetic algorithm for protein–ligand docking
B Guan, C Zhang, Y Zhao - Molecules, 2017 - mdpi.com
Protein-ligand docking is an essential part of computer-aided drug design, and it identifies
the binding patterns of proteins and ligands by computer simulation. Though Lamarckian …
the binding patterns of proteins and ligands by computer simulation. Though Lamarckian …
EDGA: a population evolution direction-guided genetic algorithm for protein–ligand docking
B Guan, C Zhang, J Ning - Journal of Computational Biology, 2016 - liebertpub.com
Protein–ligand docking can be formulated as a search algorithm associated with an
accurate scoring function. However, most current search algorithms cannot show good …
accurate scoring function. However, most current search algorithms cannot show good …
An efficient ABC_DE_based hybrid algorithm for protein–ligand docking
B Guan, C Zhang, Y Zhao - International journal of molecular sciences, 2018 - mdpi.com
Protein–ligand docking is a process of searching for the optimal binding conformation
between the receptor and the ligand. Automated docking plays an important role in drug …
between the receptor and the ligand. Automated docking plays an important role in drug …
A comparison of various optimization algorithms of protein–ligand docking programs by fitness accuracy
L Guo, Z Yan, X Zheng, L Hu, Y Yang… - Journal of molecular …, 2014 - Springer
In protein–ligand docking, an optimization algorithm is used to find the best binding pose of
a ligand against a protein target. This algorithm plays a vital role in determining the docking …
a ligand against a protein target. This algorithm plays a vital role in determining the docking …
Efficient protein-ligand docking using sustainable evolutionary algorithm
AutoDock is a widely used automated protein docking program in structure-based drug-
design. Different search algorithms, such as Simulated Annealing, traditional Genetic …
design. Different search algorithms, such as Simulated Annealing, traditional Genetic …
Random drift particle swarm optimisation algorithm for highly flexible protein-ligand docking
Y Fu, Z Chen, J Sun - Journal of theoretical biology, 2018 - Elsevier
Molecular docking has emerged as an important tool in drug design and development.
Currently, there is a relatively large and ever-increasing number of molecular docking …
Currently, there is a relatively large and ever-increasing number of molecular docking …
PSOVina: The hybrid particle swarm optimization algorithm for protein–ligand docking
Protein–ligand docking is an essential step in modern drug discovery process. The
challenge here is to accurately predict and efficiently optimize the position and orientation of …
challenge here is to accurately predict and efficiently optimize the position and orientation of …
SODOCK: Swarm optimization for highly flexible protein–ligand docking
HM Chen, BF Liu, HL Huang… - Journal of …, 2007 - Wiley Online Library
Protein–ligand docking can be formulated as a parameter optimization problem associated
with an accurate scoring function, which aims to identify the translation, orientation, and …
with an accurate scoring function, which aims to identify the translation, orientation, and …
A hybrid cuckoo search and differential evolution approach to protein–ligand docking
H Lin, SWI Siu - International Journal of Molecular Sciences, 2018 - mdpi.com
Protein–ligand docking is a molecular modeling technique that is used to predict the
conformation of a small molecular ligand at the binding pocket of a protein receptor. There …
conformation of a small molecular ligand at the binding pocket of a protein receptor. There …