Disclosing respiratory co-infections: a broad-range panel assay for avian respiratory pathogens on a nanofluidic PCR platform

G Croville, C Foret, P Heuillard, A Senet… - Avian …, 2018 - Taylor & Francis
Respiratory syndromes (RS) are among the most significant pathological conditions in
edible birds and are caused by complex coactions of pathogens and environmental factors …

Viral and bacterial profiles in endemic influenza a virus infected swine herds using nanopore metagenomic sequencing on tracheobronchial swabs

N Vereecke, S Zwickl, S Gumbert, A Graaf… - Microbiology …, 2023 - Am Soc Microbiol
Swine influenza A virus (swIAV) plays an important role in porcine respiratory infections. In
addition to its ability to cause severe disease by itself, it is important in the multietiological …

Development and Validation of PCR Diagnostic Assays for Detection of Avibacterium paragallinarum and Ornithobacterium rhinotracheale

E Krylova, A Bogomazova, N Kirsanova… - Veterinary …, 2023 - mdpi.com
Simple Summary Respiratory diseases cause severe economic damage to poultry farming.
Common respiratory diseases in poultry include ornithobacteriosis and infectious coryza …

Next-Generation Sequencing for the Detection of Microbial Agents in Avian Clinical Samples

CL Afonso, AM Afonso - Veterinary Sciences, 2023 - mdpi.com
Simple Summary Significant progress in next-generation sequencing (NGS) is positioning
this technology as a key tool to be utilized in clinical diagnosis of disease agents and/or for …

Evaluation of sampling methods for the study of avian respiratory microbiota

MEC Abundo, JM Ngunjiri, KJM Taylor, H Ji… - Avian …, 2020 - meridian.allenpress.com
Although poultry microbiome discoveries are increasing due to the potential impact on
poultry performance, studies examining the poultry respiratory microbiome are challenging …

A Multiplex PCR Method for Simultaneous Detection of Infectious Laryngotracheitis Virus and Ornithobacterium rhinotracheale

VG Nguyen, TBP Cao, VT Le, HT Truong, TTH Chu… - Veterinary …, 2023 - mdpi.com
Simple Summary Infectious respiratory diseases in poultry can be induced by viruses,
bacteria, mycoplasmas, and fungi in single or mixed infections. Multifactorial infections …

Patho-epidemiology of respiratory disease complex pathogens (RDPs) in commercial chicken

M Kaore, KP Singh, M Palanivelu, AM Kumar… - 2018 - indianjournals.com
Respiratory disease complex (RDC) has emerged as a challenge to poultry industry. A total
of 534 chicken suspected to have died of respiratory disease caused by pathogens such as …

[HTML][HTML] Simultaneous and rapid detection of avian respiratory diseases of small poultry using multiplex reverse transcription-Polymerase Chain Reaction assay

T Piri-Gharaghie, G Ghajari, NT Lahijani, RDC Pecho… - Poultry Science, 2023 - Elsevier
Major viral infections, such as Newcastle disease virus, infectious bronchitis virus, avian
influenza virus, and infectious bursal disease virus, inflict significant injury to small poultry …

[HTML][HTML] Design of a high-throughput real-time PCR system for detection of bovine respiratory and enteric pathogens

NB Goecke, BH Nielsen, MB Petersen… - Frontiers in veterinary …, 2021 - frontiersin.org
Bovine respiratory and enteric diseases have a profound negative impact on animal, health,
welfare, and productivity. A vast number of viruses and bacteria are associated with the …

[HTML][HTML] Comparable outcomes from long and short read random sequencing of total RNA for detection of pathogens in chicken respiratory samples

SL Butt, HM Kariithi, JD Volkening, TL Taylor… - Frontiers in Veterinary …, 2022 - frontiersin.org
Co-infections of avian species with different RNA viruses and pathogenic bacteria are often
misdiagnosed or incompletely characterized using targeted diagnostic methods, which …