Phylogenomics of Lophotrochozoa with consideration of systematic error

KM Kocot, TH Struck, J Merkel, DS Waits… - Systematic …, 2017 - academic.oup.com
Phylogenomic studies have improved understanding of deep metazoan phylogeny and
show promise for resolving incongruences among analyses based on limited numbers of …

Strontium isotope evidence for landscape use by early hominins

SR Copeland, M Sponheimer, DJ de Ruiter… - Nature, 2011 - nature.com
Ranging and residence patterns among early hominins have been indirectly inferred from
morphology,, stone-tool sourcing, referential models, and phylogenetic models,,. However …

Shotgun mitogenomics provides a reference phylogenetic framework and timescale for living xenarthrans

GC Gibb, FL Condamine, M Kuch, J Enk… - Molecular Biology …, 2016 - academic.oup.com
Xenarthra (armadillos, sloths, and anteaters) constitutes one of the four major clades of
placental mammals. Despite their phylogenetic distinctiveness in mammals, a reference …

Ancient proteins resolve the evolutionary history of Darwin's South American ungulates

F Welker, MJ Collins, JA Thomas, M Wadsley, S Brace… - Nature, 2015 - nature.com
No large group of recently extinct placental mammals remains as evolutionarily cryptic as
the approximately 280 genera grouped as 'South American native ungulates'. To Charles …

An aquatic sloth from the Pliocene of Peru

C Muizon, HG McDonald - Nature, 1995 - nature.com
GROUND sloths (Gravigrada, Xenarthra) are known from middle or late Oligocene to late
Pleistocene in South America1 and from late Miocene to late Pleistocene in North America2 …

[HTML][HTML] The evolutionary and phylogeographic history of woolly mammoths: a comprehensive mitogenomic analysis

D Chang, M Knapp, J Enk, S Lippold, M Kircher… - Scientific Reports, 2017 - nature.com
Near the end of the Pleistocene epoch, populations of the woolly mammoth (Mammuthus
primigenius) were distributed across parts of three continents, from western Europe and …

[HTML][HTML] Collapse of the mammoth-steppe in central Yukon as revealed by ancient environmental DNA

TJ Murchie, AJ Monteath, ME Mahony, GS Long… - Nature …, 2021 - nature.com
The temporal and spatial coarseness of megafaunal fossil records complicates attempts to to
disentangle the relative impacts of climate change, ecosystem restructuring, and human …

Biogeography in deep time–What do phylogenetics, geology, and paleoclimate tell us about early platyrrhine evolution?

RF Kay - Molecular Phylogenetics and Evolution, 2015 - Elsevier
Molecular data have converged on a consensus about the genus-level phylogeny of extant
platyrrhine monkeys, but for most extinct taxa and certainly for those older than the …

[HTML][HTML] Paleogenomics illuminates the evolutionary history of the extinct Holocene “horned” crocodile of Madagascar, Voay robustus

E Hekkala, J Gatesy, A Narechania, R Meredith… - Communications …, 2021 - nature.com
Ancient DNA is transforming our ability to reconstruct historical patterns and mechanisms
shaping modern diversity and distributions. In particular, molecular data from extinct …

[HTML][HTML] What are the consequences of combining nuclear and mitochondrial data for phylogenetic analysis? Lessons from Plethodonsalamanders and 13 other …

MC Fisher-Reid, JJ Wiens - BMC evolutionary biology, 2011 - Springer
Background The use of mitochondrial DNA data in phylogenetics is controversial, yet studies
that combine mitochondrial and nuclear DNA data (mtDNA and nucDNA) to estimate …