Genome-wide DNA methylation profiling in zebrafish

PJ Murphy, BR Cairns - Methods in Cell Biology, 2016 - Elsevier
Genomic DNA methylation functions to repress gene expression by interfering with
transcription factor binding and/or recruiting repressive chromatin machinery. Recent data …

DNA methylation profiling in zebrafish

SF Wu, H Zhang, SS Hammoud, M Potok, DA Nix… - Methods in cell …, 2011 - Elsevier
DNA methylation on cytosine in vertebrates such as zebrafish serves to silence gene
expression by interfering with the binding of certain transcription factors and through the …

Embryonic DNA methylation: insights from the genomics era

O Bogdanović… - Briefings in functional …, 2014 - academic.oup.com
DNA methylation is an epigenetic mark associated with transcriptional repression and
essential for proper vertebrate development. Because of its association with human …

Comparative epigenomic profiling of the DNA methylome in mouse and zebrafish uncovers high interspecies divergence

C Zhang, Y Hoshida, KC Sadler - Frontiers in Genetics, 2016 - frontiersin.org
The DNA methylation landscape is dynamically patterned during development and distinct
methylation patterns distinguish healthy from diseased cells. However, whether tissue …

Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos

HJ Lee, RF Lowdon, B Maricque, B Zhang… - Nature …, 2015 - nature.com
DNA methylation undergoes dynamic changes during development and cell differentiation.
Recent genome-wide studies discovered that tissue-specific differentially methylated …

[HTML][HTML] Base-resolution DNA methylation landscape of zebrafish brain and liver

A Chatterjee, PA Stockwell, JA Horsfield, IM Morison… - Genomics Data, 2014 - Elsevier
Zebrafish (Danio rerio) is a vertebrate model organism that is widely used for studying a
plethora of biological questions, including developmental processes, effects of external cues …

Immunological detection of changes in genomic DNA methylation during early zebrafish development

AB MacKay, AA Mhanni, RA McGowan, PH Krone - Genome, 2007 - cdnsciencepub.com
DNA methylation reprogramming, the erasure of DNA methylation patterns shortly after
fertilization and their reestablishment during subsequent early development, is essential for …

DNA methylation in zebrafish

MG Goll, ME Halpern - Progress in molecular biology and translational …, 2011 - Elsevier
DNA methylation is crucial for normal development and cellular differentiation in many large-
genome eukaryotes. The small tropical freshwater fish Danio rerio (zebrafish) has recently …

Evolutionary conservation of embryonic DNA methylome remodelling in distantly related teleost species

SE Ross, J Vázquez-Marín, KRB Gert… - Nucleic Acids …, 2023 - academic.oup.com
Methylation of cytosines in the CG context (mCG) is the most abundant DNA modification in
vertebrates that plays crucial roles in cellular differentiation and identity. After fertilization …

Retention of paternal DNA methylome in the developing zebrafish germline

K Skvortsova, K Tarbashevich, M Stehling… - Nature …, 2019 - nature.com
Two waves of DNA methylation reprogramming occur during mammalian embryogenesis;
during preimplantation development and during primordial germ cell (PGC) formation …