Future perspectives and challenges of fungal systematics in the age of big data
Mycological research, especially research on fungal evolution and ecology, requires a
robust and detailed fungal classification and phylogeny to facilitate efficient and informative …
robust and detailed fungal classification and phylogeny to facilitate efficient and informative …
Six key traits of fungi: their evolutionary origins and genetic bases
The fungal lineage is one of the three large eukaryotic lineages that dominate terrestrial
ecosystems. They share a common ancestor with animals in the eukaryotic supergroup …
ecosystems. They share a common ancestor with animals in the eukaryotic supergroup …
[HTML][HTML] The Sordariomycetes: an expanding resource with Big Data for mining in evolutionary genomics and transcriptomics
Advances in genomics and transcriptomics accompanying the rapid accumulation of omics
data have provided new tools that have transformed and expanded the traditional concepts …
data have provided new tools that have transformed and expanded the traditional concepts …
[PDF][PDF] Assessment of fungal diversity in the environment using metagenomics: a decade in review
S Cuadros-Orellana, LR Leite, A Smith… - Fungal Genomics & …, 2013 - researchgate.net
Fungi are ubiquitous inhabitants of soil and aquatic environments, and they establish and
maintain either parasitic or symbiotic relationships with animals and plants. They are major …
maintain either parasitic or symbiotic relationships with animals and plants. They are major …
A phylogenomic analysis of the Ascomycota
B Robbertse, JB Reeves, CL Schoch… - Fungal genetics and …, 2006 - Elsevier
An automated procedure was developed to extract orthologous sequences from fungal
genomes and incorporate them into phylogenomic analyses in a timely and efficient manner …
genomes and incorporate them into phylogenomic analyses in a timely and efficient manner …
[HTML][HTML] Fungal transcriptomics
V Bhadauria, L Popescu, WS Zhao, YL Peng - Microbiological Research, 2007 - Elsevier
We have now entered in the post-genomic era, where we have knowledge of plethora of
fungal genomes and cutting edge technology is available to study global mRNA, protein and …
fungal genomes and cutting edge technology is available to study global mRNA, protein and …
Scientific advances with Aspergillus species that are used for food and biotech applications
R Te Biesebeke, E Record - Microbes and environments, 2008 - jstage.jst.go.jp
Yeast and filamentous fungi have been used for centuries in diverse biotechnological
processes. Fungal fermentation technology is traditionally used in relation to food …
processes. Fungal fermentation technology is traditionally used in relation to food …
[HTML][HTML] e-Fungi: a data resource for comparative analysis of fungal genomes
Background The number of sequenced fungal genomes is ever increasing, with about 200
genomes already fully sequenced or in progress. Only a small percentage of those genomes …
genomes already fully sequenced or in progress. Only a small percentage of those genomes …
[HTML][HTML] Mildew-omics: how global analyses aid the understanding of life and evolution of powdery mildews
The common powdery mildew plant diseases are caused by ascomycete fungi of the order
Erysiphales. Their characteristic life style as obligate biotrophs renders functional analyses …
Erysiphales. Their characteristic life style as obligate biotrophs renders functional analyses …
Current status of systems biology in Aspergilli
MR Andersen, J Nielsen - Fungal Genetics and Biology, 2009 - Elsevier
In this review, we present a comprehensive overview of the current status of genomics,
transcriptomics, proteomics, metabolomics, and metabolic modeling in Aspergillus species …
transcriptomics, proteomics, metabolomics, and metabolic modeling in Aspergillus species …