Integrative proteomics in prostate cancer uncovers robustness against genomic and transcriptomic aberrations during disease progression

L Latonen, E Afyounian, A Jylhä, J Nättinen… - Nature …, 2018 - nature.com
To understand functional consequences of genetic and transcriptional aberrations in
prostate cancer, the proteomic changes during disease formation and progression need to …

Integrative genomic and proteomic analysis of prostate cancer reveals signatures of metastatic progression

S Varambally, J Yu, B Laxman, DR Rhodes, R Mehra… - Cancer cell, 2005 - cell.com
Molecular profiling of cancer at the transcript level has become routine. Large-scale analysis
of proteomic alterations during cancer progression has been a more daunting task. Here, we …

The proteogenomic landscape of curable prostate cancer

A Sinha, V Huang, J Livingstone, J Wang, NS Fox… - Cancer Cell, 2019 - cell.com
DNA sequencing has identified recurrent mutations that drive the aggressiveness of prostate
cancers. Surprisingly, the influence of genomic, epigenomic, and transcriptomic …

Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories

C Gerhauser, F Favero, T Risch, R Simon, L Feuerbach… - Cancer cell, 2018 - cell.com
Identifying the earliest somatic changes in prostate cancer can give important insights into
tumor evolution and aids in stratifying high-from low-risk disease. We integrated whole …

Metabolomic profiling identifies biochemical pathways associated with castration-resistant prostate cancer

AK Kaushik, SK Vareed, S Basu, V Putluri… - Journal of proteome …, 2014 - ACS Publications
Despite recent developments in treatment strategies, castration-resistant prostate cancer
(CRPC) is still the second leading cause of cancer-associated mortality among American …

Heterogeneity in the inter-tumor transcriptome of high risk prostate cancer

AW Wyatt, F Mo, K Wang, B McConeghy, S Brahmbhatt… - Genome biology, 2014 - Springer
Background Genomic analyses of hundreds of prostate tumors have defined a diverse
landscape of mutations and genome rearrangements, but the transcriptomic effect of this …

Dynamic prostate cancer transcriptome analysis delineates the trajectory to disease progression

M Bolis, D Bossi, A Vallerga, V Ceserani… - Nature …, 2021 - nature.com
Comprehensive genomic studies have delineated key driver mutations linked to disease
progression for most cancers. However, corresponding transcriptional changes remain …

Epigenomic alterations in localized and advanced prostate cancer

PC Lin, EG Giannopoulou, K Park, JM Mosquera… - Neoplasia, 2013 - Elsevier
Although prostate cancer (PCa) is the second leading cause of cancer death among men
worldwide, not all men diagnosed with PCa will die from the disease. A critical challenge …

Phosphoproteome integration reveals patient-specific networks in prostate cancer

JM Drake, EO Paull, NA Graham, JK Lee, BA Smith… - Cell, 2016 - cell.com
We used clinical tissue from lethal metastatic castration-resistant prostate cancer (CRPC)
patients obtained at rapid autopsy to evaluate diverse genomic, transcriptomic, and …

Multi-region proteome analysis quantifies spatial heterogeneity of prostate tissue biomarkers

T Guo, L Li, Q Zhong, NJ Rupp… - Life science …, 2018 - life-science-alliance.org
It remains unclear to what extent tumor heterogeneity impacts on protein biomarker
discovery. Here, we quantified proteome intra-tissue heterogeneity (ITH) based on a multi …