Genetic technologies to engineer and understand the microbiome

M Mimee - 2018 - dspace.mit.edu
The microbes that inhabit the human body are integral to human health and disease: from
inflammatory bowel disease to allergy, metabolic syndrome to autism. Due to its high …

Tunable expression tools enable single-cell strain distinction in the gut microbiome

WR Whitaker, ES Shepherd, JL Sonnenburg - Cell, 2017 - cell.com
Applying synthetic biology to engineer gut-resident microbes provides new avenues to
investigate microbe-host interactions, perform diagnostics, and deliver therapeutics. Here …

[HTML][HTML] Programming a human commensal bacterium, Bacteroides thetaiotaomicron, to sense and respond to stimuli in the murine gut microbiota

M Mimee, AC Tucker, CA Voigt, TK Lu - Cell systems, 2015 - cell.com
Engineering commensal organisms for challenging applications, such as modulating the gut
ecosystem, is hampered by the lack of genetic parts. Here, we describe promoters, ribosome …

Developing Genetic Tools for Engineered Probiotics

MB Amrofell - 2023 - search.proquest.com
The gut microbiome is increasingly understood to play a key role in human health.
Commensal gut microbes influence immunity, pathogen colonization, digestion, and brain …

Genetic engineering of resident bacteria in the gut microbiome

J Arnold, J Glazier, M Mimee - Journal of Bacteriology, 2023 - Am Soc Microbiol
Techniques by which to genetically manipulate members of the microbiota enable both the
evaluation of host-microbe interactions and an avenue by which to monitor and modulate …

An ingestible bacterial-electronic system to monitor gastrointestinal health

M Mimee, P Nadeau, A Hayward, S Carim, S Flanagan… - Science, 2018 - science.org
Biomolecular monitoring in the gastrointestinal tract could offer rapid, precise disease
detection and management but is impeded by access to the remote and complex …

Streamlined Genetic Manipulation of Diverse Bacteroides and Parabacteroides Isolates from the Human Gut Microbiota

L García-Bayona, LE Comstock - MBio, 2019 - Am Soc Microbiol
Studies of the gut microbiota have dramatically increased in recent years as the importance
of this microbial ecosystem to human health and disease is better appreciated. The …

A toolbox for microbiome engineering

MS Donia - Cell systems, 2015 - cell.com
A Toolbox for Microbiome Engineering: Cell Systems Skip to Main Content Advertisement Cell
Systems This journal offers authors two options (open access or subscription) to publish …

Targeted approaches for in situ gut microbiome manipulation

HL Lee, H Shen, IY Hwang, H Ling, WS Yew, YS Lee… - Genes, 2018 - mdpi.com
Microbial communities and their collective genomes form the gut microbiome, of which
bacteria are the major contributor. Through their secreted metabolites, bacteria interact with …

Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome

WB Jin, TT Li, D Huo, S Qu, XV Li, M Arifuzzaman… - Cell, 2022 - cell.com
Hundreds of microbiota genes are associated with host biology/disease. Unraveling the
causal contribution of a microbiota gene to host biology remains difficult because many are …