Determining intra-host genetic diversity of Citrus tristeza virus. What is the minimal sample size

S Černi, Z Šatović, J Ruščić, G Nolasco… - Phytopathol …, 2020 - torrossa.com
Intra-host populations of plant RNA viruses are genetically diverse. Due to frequent
reinfections, these populations often include phylogenetically distant variants that may have …

[PDF][PDF] Detection of divergent sequence variants within Citrus tristeza virus (CTV) isolates

L Rubio, J Guerri, P Moreno - International Organization of Citrus …, 2002 - escholarship.org
Citrus tristeza virus (CTV) isolates consist of a population of sequence variants whose
composition likely affects their biological properties. Here, the population structure of six …

Evolutionary analysis of genetic variation observed in citrus tristeza virus (CTV) after host passage

V Sentandreu, JA Castro, MA Ayllón, L Rubio… - Archives of …, 2006 - Springer
We have studied the genetic variability in two genes (p18 and p20) from two groups of Citrus
tristeza virus (CTV) isolates. One group (isolates T385, T317, T318, and T305) was derived …

Comparison of viral RNA populations of pathogenically distinct isolates of Citrus tristeza virus : application to monitoring cross‐protection

A Sambade, L Rubio, SM Garnsey, N Costa… - Plant …, 2002 - Wiley Online Library
The population of sequence variants of Citrus tristeza virus (CTV) isolates of different
geographic origins and pathogenicity properties was characterized by single‐strand …

[PDF][PDF] Variability among Italian Citrus tristeza virus isolates revealed by SSCP analysis, cloning and sequencing

S Davino, M Guardo, G Sorrentino… - … Organization of Citrus …, 2005 - escholarship.org
Since 2001, thousands of citrus plants of 15 varieties affected by Citrus tristeza virus (CTV)
have been detected in Italy. CTV isolates differ by their biological characteristics, particularly …

[PDF][PDF] Novel approaches to evaluate the genetic diversity of Citrus tristeza virus

D Raspagliesi, G Licciardello, S Rizza… - IOBC/WPRS …, 2011 - researchgate.net
The identification and characterization of different isolates of Citrus tristeza virus (CTV) is
one of the most useful tool to control the epidemic spread of the disease at a spatial scale …

Genetic Marker Analysis of a Global Collection of Isolates of Citrus tristeza virus: Characterization and Distribution of CTV Genotypes and Association with Symptoms

ME Hilf, VA Mavrodieva, SM Garnsey - Phytopathology, 2005 - Am Phytopath Society
Genetic markers amplified from three noncontiguous regions by sequence specific primers
designed from the partial or complete genome sequences of Citrus tristeza virus (CTV) …

[PDF][PDF] Characterization and classification of citrus tristeza virus isolates by amplification of multiple molecular markers

ME Hilf, SM Garnsey - International Organization of Citrus …, 2000 - escholarship.org
Nucleotide sequence and hybridization data using cDNA clones from the non-conserved
regions of the genomes of the Israeli CTV isolate VT and the Florida isolates T3, T30, and …

PCR bias associated with conserved primer binding sites, used to determine genotype diversity within Citrus tristeza virus populations

DA Read, G Pietersen - Journal of virological methods, 2016 - Elsevier
Citrus tristeza virus (CTV) is present in almost all of the major citrus production areas where
it continues to reduce the profitability of citriculture. The accurate characterisation of CTV …

Increased diversity of citrus tristeza virus in Europe

J Zindović, M Čizmović, A Vučurović… - Plant …, 2024 - Am Phytopath Society
This study investigated the genetic diversity of Citrus tristeza virus (CTV) isolates from
Montenegro and Croatia, European countries with the northernmost citrus-growing regions …