[HTML][HTML] Advances in protein structure prediction and design
The prediction of protein three-dimensional structure from amino acid sequence has been a
grand challenge problem in computational biophysics for decades, owing to its intrinsic …
grand challenge problem in computational biophysics for decades, owing to its intrinsic …
[HTML][HTML] Protein structure prediction: inroads to biology
D Petrey, B Honig - Molecular cell, 2005 - cell.com
In recent years, there has been significant progress in the ability to predict the three-
dimensional structure of proteins from their amino acid sequence. Progress has been due to …
dimensional structure of proteins from their amino acid sequence. Progress has been due to …
[PDF][PDF] ASTRO-FOLD: a combinatorial and global optimization framework for ab initio prediction of three-dimensional structures of proteins from the amino acid …
JL Klepeis, CA Floudas - Biophysical journal, 2003 - cell.com
The field of computational biology has been revolutionized by recent advances in genomics.
The completion of a number of genome projects, including that of the human genome, has …
The completion of a number of genome projects, including that of the human genome, has …
Protein structure prediction: concepts and applications
A Tramontano - 2006 - books.google.com
While most textbooks on bioinformatics focus on genetic algorithms and treat protein
structure prediction only superficially, this course book assumes a novel and unique focus …
structure prediction only superficially, this course book assumes a novel and unique focus …
Protein structure prediction: when is it useful?
Y Zhang - Current opinion in structural biology, 2009 - Elsevier
Computationally predicted three-dimensional structure of protein molecules has
demonstrated the usefulness in many areas of biomedicine, ranging from approximate …
demonstrated the usefulness in many areas of biomedicine, ranging from approximate …
Protein structure prediction and model quality assessment
A Kryshtafovych, K Fidelis - Drug discovery today, 2009 - Elsevier
Protein structures have proven to be a crucial piece of information for biomedical research.
Of the millions of currently sequenced proteins only a small fraction is experimentally solved …
Of the millions of currently sequenced proteins only a small fraction is experimentally solved …
Computational protein structure refinement: almost there, yet still so far to go
M Feig - Wiley Interdisciplinary Reviews: Computational …, 2017 - Wiley Online Library
Protein structures are essential in modern biology yet experimental methods are far from
being able to catch up with the rapid increase in available genomic data. Computational …
being able to catch up with the rapid increase in available genomic data. Computational …
Algorithms for protein design
Computational structure-based protein design programs are becoming an increasingly
important tool in molecular biology. These programs compute protein sequences that are …
important tool in molecular biology. These programs compute protein sequences that are …
[HTML][HTML] The opportunities and challenges posed by the new generation of deep learning-based protein structure predictors
The function of proteins can often be inferred from their three-dimensional structures.
Experimental structural biologists spent decades studying these structures, but the …
Experimental structural biologists spent decades studying these structures, but the …
Protein structure prediction: conventional and deep learning perspectives
VA Jisna, PB Jayaraj - The protein journal, 2021 - Springer
Protein structure prediction is a way to bridge the sequence-structure gap, one of the main
challenges in computational biology and chemistry. Predicting any protein's accurate …
challenges in computational biology and chemistry. Predicting any protein's accurate …