A highly multiplexed assay to monitor virulence, fungicide resistance and gene flow in the fungal wheat pathogen Zymoseptoria tritici

H Bellah, G Gazeau, S Gélisse, R Amezrou, TC Marcel… - bioRxiv, 2022 - biorxiv.org
… The genotyping of transposable element insertions in the MFS1 promoter region was not …
a clear assignment of amplicons to transposable element insertion genotypes, but our data …

A population-level invasion by transposable elements in a fungal pathogen

U Oggenfuss, T Badet, T Wicker, FE Hartmann… - BioRxiv, 2020 - biorxiv.org
… Genome evolution is driven by the activity of transposable elements (TEs). The spread of …
from populations across the globe of Zymoseptoria tritici, a major fungal wheat pathogen. We …

Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen

LN Abraham, U Oggenfuss, D Croll - Mbio, 2024 - Am Soc Microbiol
… We investigated the most dynamic regions of the genome of Zymoseptoria tritici, a major …
transcription of transposable elements. A large proportion of the transposable elements not only …

A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen

U Oggenfuss, T Badet, T Wicker, FE Hartmann… - Elife, 2021 - elifesciences.org
… Genome evolution is driven by the activity of transposable elements (TEs). The spread of …
from populations across the globe of Zymoseptoria tritici, a major fungal wheat pathogen. We …

A small secreted protein in Zymoseptoria tritici is responsible for avirulence on wheat cultivars carrying the Stb6 resistance gene

Z Zhong, TC Marcel, FE Hartmann, X Ma… - New …, 2017 - Wiley Online Library
… AvrStb6 is located in a highly polymorphic subtelomeric region and is surrounded by
transposable elements, which may facilitate its rapid evolution to overcome Stb6 resistance. …

Plasticity of the MFS1 Promoter Leads to Multidrug Resistance in the Wheat Pathogen Zymoseptoria tritici

S Omrane, C Audéon, A Ignace, C Duplaix, L Aouini… - MSphere, 2017 - Am Soc Microbiol
… mobilization of the transposable element Mftc1 in M… tritici whole-genome sequences and
associated transcriptomic data will shed light on not only the influence of transposable elements

Quantitative trait locus mapping reveals complex genetic architecture of quantitative virulence in the wheat pathogen Zymoseptoria tritici

EL Stewart, D Croll, MH Lendenmann… - Molecular plant …, 2018 - Wiley Online Library
… This gene-poor region contained all transposable elements (TEs) found within the confidence
interval (Fig. 5D). Three classes of TEs were found in this region, including Copia, Gypsy …

Recent transposable element bursts triggered by insertions near genes in a fungal pathogen

U Oggenfuss, D Croll - BioRxiv, 2022 - biorxiv.org
… Here, we analyzed a set of 19 telomere-to-telomere genomes of the fungal wheat pathogen
Zymoseptoria tritici. Phylogenetic reconstruction and ancestral state estimates of individual …

[PDF][PDF] Population genomics of adaptation in the fungal wheat pathogen Zymoseptoria tritici

FE Hartmann - 2017 - research-collection.ethz.ch
… to study the genetic basis of adaptation in populations of Zymoseptoria tritici (syn. … The
direct proximity of transposable element clusters likely generated extensive chromosomal …

Ago1 Affects the Virulence of the Fungal Plant Pathogen Zymoseptoria tritici

M Habig, K Schotanus, K Hufnagel, P Happel… - Genes, 2021 - mdpi.com
… Herein, we elucidate whether the RNAi machinery is conserved within the genus Zymoseptoria.
… We show that the RNAi machinery is conserved among closely related Zymoseptoria